RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TNPO1Q92973 898 aaKnown RBP23■■□□□ 1.27
USP49-202ENST00000373010 TRIM6-TRIM34B2RNG4 842 aa23■■□□□ 1.27
USP49-202ENST00000373010 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
USP49-202ENST00000373010 RILPL2Q969X0 211 aa23■■□□□ 1.27
USP49-202ENST00000373010 MAP3K2Q9Y2U5 619 aa23■■□□□ 1.27
USP49-202ENST00000373010 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
USP49-202ENST00000373010 ADAMTS7Q9UKP4 1686 aa22.99■■□□□ 1.27
USP49-202ENST00000373010 BRPF3Q9ULD4 1205 aa22.99■■□□□ 1.27
USP49-202ENST00000373010 RAB3GAP1Q15042 981 aa22.98■■□□□ 1.27
USP49-202ENST00000373010 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
USP49-202ENST00000373010 RAB11FIP3O75154 756 aa22.97■■□□□ 1.27
USP49-202ENST00000373010 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
USP49-202ENST00000373010 IL27Q8NEV9 243 aa22.97■■□□□ 1.27
USP49-202ENST00000373010 ESYT1Q9BSJ8 1104 aa22.97■■□□□ 1.27
USP49-202ENST00000373010 RHPN1Q8TCX5 695 aa22.97■■□□□ 1.27
USP49-202ENST00000373010 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
USP49-202ENST00000373010 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
USP49-202ENST00000373010 COL18A1P39060 1754 aa22.96■■□□□ 1.27
USP49-202ENST00000373010 TRAK2O60296 914 aa22.96■■□□□ 1.27
USP49-202ENST00000373010 CHMLP26374 656 aa22.96■■□□□ 1.27
USP49-202ENST00000373010 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
USP49-202ENST00000373010 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
USP49-202ENST00000373010 GZF1Q9H116 711 aaPredicted RBP22.95■■□□□ 1.26
USP49-202ENST00000373010 DCCP43146 1447 aa22.95■■□□□ 1.26
USP49-202ENST00000373010 MEGF6O75095 1541 aa22.95■■□□□ 1.26
USP49-202ENST00000373010 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
USP49-202ENST00000373010 CWF19L2Q2TBE0 894 aaKnown RBP22.94■■□□□ 1.26
USP49-202ENST00000373010 CRYBG1Q9Y4K1 1723 aa22.94■■□□□ 1.26
USP49-202ENST00000373010 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
USP49-202ENST00000373010 NPHP3Q7Z494 1330 aa22.94■■□□□ 1.26
USP49-202ENST00000373010 LMTK3Q96Q04 1460 aa22.94■■□□□ 1.26
USP49-202ENST00000373010 DDX11L8A8MPP1 907 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 HSPA2P54652 639 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
USP49-202ENST00000373010 AOX1Q06278 1338 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 PHKG2P15735 406 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 AIMP1Q12904 312 aaKnown RBP22.93■■□□□ 1.26
USP49-202ENST00000373010 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
USP49-202ENST00000373010 AK9Q5TCS8 1911 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 ALDH1L1O75891 902 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 MAP4K4O95819 1239 aaPredicted RBP22.92■■□□□ 1.26
USP49-202ENST00000373010 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 SSFA2P28290 1259 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 CADPS2Q86UW7 1296 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
USP49-202ENST00000373010 ST18O60284 1047 aa22.91■■□□□ 1.26
USP49-202ENST00000373010 PDIA6Q15084 440 aa22.91■■□□□ 1.26
USP49-202ENST00000373010 DDX21Q9NR30 783 aaKnown RBP eCLIP22.91■■□□□ 1.26
USP49-202ENST00000373010 SPG7Q9UQ90 795 aa22.91■■□□□ 1.26
USP49-202ENST00000373010 C5P01031 1676 aa22.91■■□□□ 1.26
USP49-202ENST00000373010 PI4K2BQ8TCG2 481 aa22.9■■□□□ 1.26
USP49-202ENST00000373010 GBP4Q96PP9 640 aa22.9■■□□□ 1.26
USP49-202ENST00000373010 ANO2Q9NQ90 1003 aa22.9■■□□□ 1.26
USP49-202ENST00000373010 OS9Q13438 667 aaPredicted RBP22.89■■□□□ 1.25
USP49-202ENST00000373010 MTX1Q13505 466 aa22.89■■□□□ 1.25
USP49-202ENST00000373010 IL25Q9H293 177 aa22.89■■□□□ 1.25
USP49-202ENST00000373010 PALD1Q9ULE6 856 aa22.89■■□□□ 1.25
USP49-202ENST00000373010 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
USP49-202ENST00000373010 SPATA31A3Q5VYP0 1347 aa22.88■■□□□ 1.25
USP49-202ENST00000373010 MYL6BP14649 208 aa22.87■■□□□ 1.25
USP49-202ENST00000373010 HSP90AB4PQ58FF6 505 aa22.87■■□□□ 1.25
USP49-202ENST00000373010 LINS1Q8NG48 757 aa22.87■■□□□ 1.25
USP49-202ENST00000373010 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
USP49-202ENST00000373010 DDX58O95786 925 aaKnown RBP22.87■■□□□ 1.25
USP49-202ENST00000373010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.87■■□□□ 1.252e-6■■■□□ 19.2
USP49-202ENST00000373010 CYP27B1O15528 508 aa22.86■■□□□ 1.25
USP49-202ENST00000373010 ZNF496Q96IT1 587 aaPredicted RBP22.86■■□□□ 1.25
USP49-202ENST00000373010 ARXQ96QS3 562 aa22.86■■□□□ 1.25
USP49-202ENST00000373010 NEK4P51957 841 aa22.86■■□□□ 1.25
USP49-202ENST00000373010 SUCLG2Q96I99 432 aa22.86■■□□□ 1.25
USP49-202ENST00000373010 GRM8O00222 908 aa22.85■■□□□ 1.25
USP49-202ENST00000373010 ZGPATQ8N5A5 531 aaKnown RBP22.85■■□□□ 1.25
USP49-202ENST00000373010 MCCP23508 829 aa22.84■■□□□ 1.25
USP49-202ENST00000373010 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
USP49-202ENST00000373010 KAZALD1Q96I82 304 aa22.84■■□□□ 1.25
USP49-202ENST00000373010 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
USP49-202ENST00000373010 IGKV5-2P06315 115 aa22.83■■□□□ 1.25
USP49-202ENST00000373010 XAGE3Q8WTP9 111 aa22.83■■□□□ 1.25
USP49-202ENST00000373010 PIP4K2AP48426 406 aaPredicted RBP22.82■■□□□ 1.24
USP49-202ENST00000373010 PKP1Q13835 747 aa22.82■■□□□ 1.24
USP49-202ENST00000373010 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
USP49-202ENST00000373010 BICC1Q9H694 974 aaKnown RBP22.82■■□□□ 1.24
USP49-202ENST00000373010 ABCC6O95255 1503 aa22.82■■□□□ 1.24
USP49-202ENST00000373010 COPS6Q7L5N1 327 aa22.82■■□□□ 1.24
USP49-202ENST00000373010 USP16Q9Y5T5 823 aa22.82■■□□□ 1.24
USP49-202ENST00000373010 L1TD1Q5T7N2 865 aaKnown RBP22.81■■□□□ 1.24
USP49-202ENST00000373010 RTN4Q9NQC3 1192 aaKnown RBP22.81■■□□□ 1.24
USP49-202ENST00000373010 HDAC5Q9UQL6 1122 aa22.81■■□□□ 1.24
USP49-202ENST00000373010 UTYO14607 1347 aa22.81■■□□□ 1.24
USP49-202ENST00000373010 PKD1L3Q7Z443 1732 aa22.81■■□□□ 1.24
USP49-202ENST00000373010 TTC5Q8N0Z6 440 aa22.81■■□□□ 1.24
USP49-202ENST00000373010 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
USP49-202ENST00000373010 GOLGA6L3A6NEY3 463 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 LARP1Q6PKG0 1096 aaKnown RBP22.8■■□□□ 1.24
USP49-202ENST00000373010 BRINP3Q76B58 766 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 CNTROBQ8N137 903 aa22.8■■□□□ 1.24
USP49-202ENST00000373010 USP42Q9H9J4 1324 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms