RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
CTPS1-202ENST00000372621 LMO7Q8WWI1 1683 aa15.5■□□□□ 0.07
CTPS1-202ENST00000372621 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
CTPS1-202ENST00000372621 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
CTPS1-202ENST00000372621 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 RHPN1Q8TCX5 695 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
CTPS1-202ENST00000372621 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 HOXB7P09629 217 aa15.49■□□□□ 0.07
CTPS1-202ENST00000372621 RGPD2P0DJD1 1756 aa15.48■□□□□ 0.07
CTPS1-202ENST00000372621 MBD3O95983 291 aa15.48■□□□□ 0.07
CTPS1-202ENST00000372621 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
CTPS1-202ENST00000372621 IP6K1Q92551 441 aa15.48■□□□□ 0.07
CTPS1-202ENST00000372621 SURF6O75683 361 aaKnown RBP15.47■□□□□ 0.07
CTPS1-202ENST00000372621 NBPF7P0C2Y1 421 aaPredicted RBP15.47■□□□□ 0.07
CTPS1-202ENST00000372621 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
CTPS1-202ENST00000372621 FOXD4L5Q5VV16 416 aaPredicted RBP15.47■□□□□ 0.07
CTPS1-202ENST00000372621 FOXD4L4Q8WXT5 416 aaPredicted RBP15.47■□□□□ 0.07
CTPS1-202ENST00000372621 SGSM2O43147 1006 aa15.47■□□□□ 0.07
CTPS1-202ENST00000372621 RAD50Q92878 1312 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 KIF1BPQ96EK5 621 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 LGR6Q9HBX8 967 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 USP42Q9H9J4 1324 aaKnown RBP15.46■□□□□ 0.07
CTPS1-202ENST00000372621 TCHHQ07283 1943 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 SYCE3A1L190 88 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
CTPS1-202ENST00000372621 SETD1BQ9UPS6 1966 aaKnown RBP15.46■□□□□ 0.06
CTPS1-202ENST00000372621 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.06
CTPS1-202ENST00000372621 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
CTPS1-202ENST00000372621 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
CTPS1-202ENST00000372621 DNAAF4Q8WXU2 420 aa15.45■□□□□ 0.06
CTPS1-202ENST00000372621 LSG1Q9H089 658 aaKnown RBP15.45■□□□□ 0.06
CTPS1-202ENST00000372621 ADCY9O60503 1353 aa15.45■□□□□ 0.06
CTPS1-202ENST00000372621 TTC14Q96N46 770 aa15.45■□□□□ 0.06
CTPS1-202ENST00000372621 PI4KAP2A4QPH2 592 aa15.44■□□□□ 0.06
CTPS1-202ENST00000372621 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
CTPS1-202ENST00000372621 PI4KAP1Q8N8J0 262 aa15.44■□□□□ 0.06
CTPS1-202ENST00000372621 MAP4K4O95819 1239 aaPredicted RBP15.44■□□□□ 0.06
CTPS1-202ENST00000372621 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.44■□□□□ 0.06
CTPS1-202ENST00000372621 NOL7Q9UMY1 257 aaKnown RBP15.44■□□□□ 0.06
CTPS1-202ENST00000372621 SNX14Q9Y5W7 946 aa15.44■□□□□ 0.06
CTPS1-202ENST00000372621 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
CTPS1-202ENST00000372621 KCNQ3O43525 872 aa15.43■□□□□ 0.06
CTPS1-202ENST00000372621 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
CTPS1-202ENST00000372621 MTX1Q13505 466 aa15.43■□□□□ 0.06
CTPS1-202ENST00000372621 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
CTPS1-202ENST00000372621 CHMP4AQ9BY43 222 aa15.43■□□□□ 0.06
CTPS1-202ENST00000372621 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
CTPS1-202ENST00000372621 WDR33Q9C0J8 1336 aaKnown RBP15.42■□□□□ 0.06
CTPS1-202ENST00000372621 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
CTPS1-202ENST00000372621 TTC41PQ6P2S7 1318 aa15.42■□□□□ 0.06
CTPS1-202ENST00000372621 OFD1O75665 1012 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 AKAP4Q5JQC9 854 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
CTPS1-202ENST00000372621 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 TMEM87AQ8NBN3 555 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
CTPS1-202ENST00000372621 HEG1Q9ULI3 1381 aa15.4■□□□□ 0.06
CTPS1-202ENST00000372621 C14orf37Q86TY3 774 aa15.4■□□□□ 0.06
CTPS1-202ENST00000372621 SIPA1L3O60292 1781 aaPredicted RBP15.4■□□□□ 0.06
CTPS1-202ENST00000372621 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
CTPS1-202ENST00000372621 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
CTPS1-202ENST00000372621 OVOS2A0A0G2JMS6 1433 aa15.4■□□□□ 0.06
CTPS1-202ENST00000372621 BTBD11A6QL63 1104 aa15.39■□□□□ 0.06
CTPS1-202ENST00000372621 USP48Q86UV5 1035 aa15.39■□□□□ 0.06
CTPS1-202ENST00000372621 ANXA1P04083 346 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 AK2P54819 239 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 RUFY3Q7L099 469 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 PXDNQ92626 1479 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 GLRX3O76003 335 aaKnown RBP15.39■□□□□ 0.05
CTPS1-202ENST00000372621 TPM2P07951 284 aa15.39■□□□□ 0.05
CTPS1-202ENST00000372621 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
CTPS1-202ENST00000372621 CAMTA1Q9Y6Y1 1673 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
CTPS1-202ENST00000372621 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 SYAP1Q96A49 352 aaPredicted RBP15.38■□□□□ 0.05
CTPS1-202ENST00000372621 TEFQ10587 303 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 GDPD2Q9HCC8 539 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 ZNF530Q6P9A1 599 aaPredicted RBP15.38■□□□□ 0.05
CTPS1-202ENST00000372621 KCNB2Q92953 911 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 LRRC59Q96AG4 307 aaKnown RBP15.38■□□□□ 0.05
CTPS1-202ENST00000372621 TSPY26PQ9H489 355 aa15.38■□□□□ 0.05
CTPS1-202ENST00000372621 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 SPG7Q9UQ90 795 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 ZKSCAN5Q9Y2L8 839 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
CTPS1-202ENST00000372621 RNMTO43148 476 aaKnown RBP15.37■□□□□ 0.05
CTPS1-202ENST00000372621 PLEKHO1Q53GL0 409 aaPredicted RBP15.37■□□□□ 0.05
CTPS1-202ENST00000372621 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms