RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
MMP9-201ENST00000372330 NEK4P51957 841 aa21.93■■□□□ 1.1
MMP9-201ENST00000372330 C1orf115Q9H7X2 142 aa21.93■■□□□ 1.1
MMP9-201ENST00000372330 FAM53CQ9NYF3 392 aa21.92■■□□□ 1.1
MMP9-201ENST00000372330 SDSP20132 328 aa21.91■■□□□ 1.1
MMP9-201ENST00000372330 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
MMP9-201ENST00000372330 TTC21BQ7Z4L5 1316 aa21.91■■□□□ 1.1
MMP9-201ENST00000372330 DLG5Q8TDM6 1919 aa21.91■■□□□ 1.1
MMP9-201ENST00000372330 CCDC112Q8NEF3 446 aa21.91■■□□□ 1.1
MMP9-201ENST00000372330 ELL2O00472 640 aaPredicted RBP21.9■■□□□ 1.1
MMP9-201ENST00000372330 ZNF397Q8NF99 534 aaPredicted RBP21.9■■□□□ 1.1
MMP9-201ENST00000372330 SLIT1O75093 1534 aa21.9■■□□□ 1.1
MMP9-201ENST00000372330 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
MMP9-201ENST00000372330 UBE2HP62256 183 aa21.9■■□□□ 1.1
MMP9-201ENST00000372330 NRKQ7Z2Y5 1582 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 ABCC4O15439 1325 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 ACEP12821 1306 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 PTPRUQ92729 1446 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 FAM83GA6ND36 823 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 FUCA2Q9BTY2 467 aa21.89■■□□□ 1.1
MMP9-201ENST00000372330 ARHGAP23Q9P227 1491 aa21.89■■□□□ 1.09
MMP9-201ENST00000372330 PLCB2Q00722 1185 aa21.89■■□□□ 1.09
MMP9-201ENST00000372330 C8orf58Q8NAV2 365 aa21.88■■□□□ 1.09
MMP9-201ENST00000372330 OVOS2A0A0J9YW53 1432 aa21.88■■□□□ 1.09
MMP9-201ENST00000372330 OVOS2Q6IE36 1432 aa21.88■■□□□ 1.09
MMP9-201ENST00000372330 ANAPC15P60006 121 aa21.88■■□□□ 1.09
MMP9-201ENST00000372330 IRX3P78415 501 aaPredicted RBP21.88■■□□□ 1.09
MMP9-201ENST00000372330 EIF4A2Q14240 407 aaKnown RBP21.88■■□□□ 1.09
MMP9-201ENST00000372330 TOPAZ1Q8N9V7 1692 aa21.87■■□□□ 1.09
MMP9-201ENST00000372330 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 THEMISQ8N1K5 641 aaPredicted RBP21.86■■□□□ 1.09
MMP9-201ENST00000372330 USP6P35125 1406 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 TNNT1P13805 278 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 MCCP23508 829 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 GDPD2Q9HCC8 539 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 RTL1A6NKG5 1358 aa21.86■■□□□ 1.09
MMP9-201ENST00000372330 CAPN2P17655 700 aa21.85■■□□□ 1.09
MMP9-201ENST00000372330 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
MMP9-201ENST00000372330 SMARCA5O60264 1052 aaPredicted RBP21.85■■□□□ 1.09
MMP9-201ENST00000372330 AMOTL2Q9Y2J4 779 aa21.85■■□□□ 1.09
MMP9-201ENST00000372330 SLFNL1Q499Z3 407 aa21.84■■□□□ 1.09
MMP9-201ENST00000372330 SPC24Q8NBT2 197 aa21.84■■□□□ 1.09
MMP9-201ENST00000372330 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
MMP9-201ENST00000372330 AP5Z1O43299 807 aa21.83■■□□□ 1.09
MMP9-201ENST00000372330 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.83■■□□□ 1.09
MMP9-201ENST00000372330 TBX22Q9Y458 520 aa21.83■■□□□ 1.08
MMP9-201ENST00000372330 ATP6V1DQ9Y5K8 247 aa21.83■■□□□ 1.08
MMP9-201ENST00000372330 RPAP1Q9BWH6 1393 aaPredicted RBP21.83■■□□□ 1.08
MMP9-201ENST00000372330 C16orf71Q8IYS4 520 aaPredicted RBP21.82■■□□□ 1.08
MMP9-201ENST00000372330 C16orf45Q96MC5 204 aaPredicted RBP21.82■■□□□ 1.08
MMP9-201ENST00000372330 USP31Q70CQ4 1352 aa21.82■■□□□ 1.08
MMP9-201ENST00000372330 CCDC192P0DO97 292 aa21.81■■□□□ 1.08
MMP9-201ENST00000372330 IL17RAQ96F46 866 aa21.81■■□□□ 1.08
MMP9-201ENST00000372330 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
MMP9-201ENST00000372330 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
MMP9-201ENST00000372330 PTGS1P23219 599 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 CYP2C19P33261 490 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 KMT5BQ4FZB7 885 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 EFCC1Q9HA90 598 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 KIF1BPQ96EK5 621 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 RGS12O14924 1447 aa21.8■■□□□ 1.08
MMP9-201ENST00000372330 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
MMP9-201ENST00000372330 ERICH4A6NGS2 130 aa21.79■■□□□ 1.08
MMP9-201ENST00000372330 SOX12O15370 315 aa21.79■■□□□ 1.08
MMP9-201ENST00000372330 HAP1P54257 671 aaPredicted RBP21.79■■□□□ 1.08
MMP9-201ENST00000372330 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
MMP9-201ENST00000372330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.79■■□□□ 1.08
MMP9-201ENST00000372330 ANKRD44Q8N8A2 993 aa21.79■■□□□ 1.08
MMP9-201ENST00000372330 CHL1O00533 1208 aa21.78■■□□□ 1.08
MMP9-201ENST00000372330 FAM200AQ8TCP9 573 aa21.78■■□□□ 1.08
MMP9-201ENST00000372330 FOXD4L6Q3SYB3 417 aaPredicted RBP21.78■■□□□ 1.08
MMP9-201ENST00000372330 FOXD4L3Q6VB84 417 aaPredicted RBP21.78■■□□□ 1.08
MMP9-201ENST00000372330 PAXIP1Q6ZW49 1069 aaPredicted RBP21.78■■□□□ 1.08
MMP9-201ENST00000372330 NOL10Q9BSC4 688 aaKnown RBP21.78■■□□□ 1.08
MMP9-201ENST00000372330 OSBPL3Q9H4L5 887 aa21.78■■□□□ 1.08
MMP9-201ENST00000372330 GIMAP6Q6P9H5 292 aa21.77■■□□□ 1.08
MMP9-201ENST00000372330 CCDC186Q7Z3E2 898 aa21.77■■□□□ 1.08
MMP9-201ENST00000372330 FEZ2Q9UHY8 353 aaPredicted RBP21.77■■□□□ 1.08
MMP9-201ENST00000372330 TTC21AQ8NDW8 1320 aa21.77■■□□□ 1.08
MMP9-201ENST00000372330 TEX2Q8IWB9 1127 aa21.77■■□□□ 1.07
MMP9-201ENST00000372330 ERO1AQ96HE7 468 aa21.77■■□□□ 1.07
MMP9-201ENST00000372330 CNPY2Q9Y2B0 182 aa21.77■■□□□ 1.07
MMP9-201ENST00000372330 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
MMP9-201ENST00000372330 CEP170BQ9Y4F5 1589 aaPredicted RBP21.76■■□□□ 1.07
MMP9-201ENST00000372330 ZSCAN22P10073 491 aaPredicted RBP21.76■■□□□ 1.07
MMP9-201ENST00000372330 BMS1Q14692 1282 aaKnown RBP21.76■■□□□ 1.07
MMP9-201ENST00000372330 NAA30Q147X3 362 aaPredicted RBP21.76■■□□□ 1.07
MMP9-201ENST00000372330 TPD52L1Q16890 204 aaPredicted RBP21.76■■□□□ 1.07
MMP9-201ENST00000372330 KRT24Q2M2I5 525 aa21.76■■□□□ 1.07
MMP9-201ENST00000372330 CEP135Q66GS9 1140 aa21.76■■□□□ 1.07
MMP9-201ENST00000372330 RBM6P78332 1123 aaKnown RBP21.75■■□□□ 1.07
MMP9-201ENST00000372330 MCM10Q7L590 875 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms