RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 PROSER3Q2NL68 480 aa22.7■■□□□ 1.22
CD40-202ENST00000372285 BARGINQ6ZT62 677 aa22.7■■□□□ 1.22
CD40-202ENST00000372285 BCL9LQ86UU0 1499 aa22.69■■□□□ 1.22
CD40-202ENST00000372285 MEIS3Q99687 375 aa22.69■■□□□ 1.22
CD40-202ENST00000372285 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
CD40-202ENST00000372285 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
CD40-202ENST00000372285 ATP10DQ9P241 1426 aa22.68■■□□□ 1.22
CD40-202ENST00000372285 ADCY9O60503 1353 aa22.68■■□□□ 1.22
CD40-202ENST00000372285 NGLY1Q96IV0 654 aa22.68■■□□□ 1.22
CD40-202ENST00000372285 PDZRN3Q9UPQ7 1066 aa22.68■■□□□ 1.22
CD40-202ENST00000372285 FNBP4Q8N3X1 1017 aaPredicted RBP22.67■■□□□ 1.22
CD40-202ENST00000372285 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
CD40-202ENST00000372285 USP16Q9Y5T5 823 aa22.67■■□□□ 1.22
CD40-202ENST00000372285 PI4KAP2A4QPH2 592 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 VPS72Q15906 364 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
CD40-202ENST00000372285 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 PI4KAP1Q8N8J0 262 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 C8orf37Q96NL8 207 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 DOT1LQ8TEK3 1739 aa22.66■■□□□ 1.22
CD40-202ENST00000372285 DDB1Q16531 1140 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 GNAI3P08754 354 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 HSPA1LP34931 641 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 KSR2Q6VAB6 950 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 PIGBQ92521 554 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
CD40-202ENST00000372285 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.22
CD40-202ENST00000372285 BCL9O00512 1426 aa22.64■■□□□ 1.22
CD40-202ENST00000372285 RGS3P49796 1198 aa22.64■■□□□ 1.21
CD40-202ENST00000372285 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
CD40-202ENST00000372285 SRCIN1Q9C0H9 1055 aa22.64■■□□□ 1.21
CD40-202ENST00000372285 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.21
CD40-202ENST00000372285 DDX58O95786 925 aaKnown RBP22.63■■□□□ 1.21
CD40-202ENST00000372285 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
CD40-202ENST00000372285 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
CD40-202ENST00000372285 LRP10Q7Z4F1 713 aa22.62■■□□□ 1.21
CD40-202ENST00000372285 GNAI2P04899 355 aa22.62■■□□□ 1.21
CD40-202ENST00000372285 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
CD40-202ENST00000372285 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
CD40-202ENST00000372285 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
CD40-202ENST00000372285 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
CD40-202ENST00000372285 ALDH1L1O75891 902 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 MYL6BP14649 208 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 NUCB1Q02818 461 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
CD40-202ENST00000372285 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
CD40-202ENST00000372285 IBTKQ9P2D0 1353 aaPredicted RBP22.58■■□□□ 1.21
CD40-202ENST00000372285 XAGE3Q8WTP9 111 aa22.58■■□□□ 1.21
CD40-202ENST00000372285 DCTPP1Q9H773 170 aa22.58■■□□□ 1.21
CD40-202ENST00000372285 ARFGEF2Q9Y6D5 1785 aa22.57■■□□□ 1.2
CD40-202ENST00000372285 PDE4AP27815 886 aa22.57■■□□□ 1.2
CD40-202ENST00000372285 AIMP1Q12904 312 aaKnown RBP22.57■■□□□ 1.2
CD40-202ENST00000372285 COPS6Q7L5N1 327 aa22.57■■□□□ 1.2
CD40-202ENST00000372285 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
CD40-202ENST00000372285 USP21Q9UK80 565 aa22.57■■□□□ 1.2
CD40-202ENST00000372285 BACH2Q9BYV9 841 aa22.57■■□□□ 1.2
CD40-202ENST00000372285 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
CD40-202ENST00000372285 HMMRO75330 724 aa22.56■■□□□ 1.2
CD40-202ENST00000372285 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
CD40-202ENST00000372285 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
CD40-202ENST00000372285 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
CD40-202ENST00000372285 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
CD40-202ENST00000372285 LINS1Q8NG48 757 aa22.56■■□□□ 1.2
CD40-202ENST00000372285 PRIM1P49642 420 aaKnown RBP22.55■■□□□ 1.2
CD40-202ENST00000372285 FAM98CQ17RN3 349 aaKnown RBP22.55■■□□□ 1.2
CD40-202ENST00000372285 CHD1LQ86WJ1 897 aa22.55■■□□□ 1.2
CD40-202ENST00000372285 THSD7AQ9UPZ6 1657 aa22.55■■□□□ 1.2
CD40-202ENST00000372285 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
CD40-202ENST00000372285 ATP8B2P98198 1209 aa22.54■■□□□ 1.2
CD40-202ENST00000372285 ANKRD13DQ6ZTN6 518 aa22.54■■□□□ 1.2
CD40-202ENST00000372285 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
CD40-202ENST00000372285 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
CD40-202ENST00000372285 PIP4K2AP48426 406 aaPredicted RBP22.53■■□□□ 1.2
CD40-202ENST00000372285 MEX3CQ5U5Q3 659 aaKnown RBP22.53■■□□□ 1.2
CD40-202ENST00000372285 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.2
CD40-202ENST00000372285 METTL22Q9BUU2 404 aaPredicted RBP22.52■■□□□ 1.2
CD40-202ENST00000372285 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.2
CD40-202ENST00000372285 TJP1Q07157 1748 aa22.52■■□□□ 1.2
CD40-202ENST00000372285 A1BGP04217 495 aa22.51■■□□□ 1.19
CD40-202ENST00000372285 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
CD40-202ENST00000372285 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
CD40-202ENST00000372285 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
CD40-202ENST00000372285 NEXNQ0ZGT2 675 aa22.51■■□□□ 1.19
CD40-202ENST00000372285 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
CD40-202ENST00000372285 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
CD40-202ENST00000372285 UTYO14607 1347 aa22.5■■□□□ 1.19
CD40-202ENST00000372285 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
CD40-202ENST00000372285 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
CD40-202ENST00000372285 CICQ96RK0 1608 aaPredicted RBP22.5■■□□□ 1.19
CD40-202ENST00000372285 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
CD40-202ENST00000372285 CWF19L2Q2TBE0 894 aaKnown RBP22.49■■□□□ 1.19
CD40-202ENST00000372285 C8orf34Q49A92 452 aa22.49■■□□□ 1.19
CD40-202ENST00000372285 HDAC5Q9UQL6 1122 aa22.49■■□□□ 1.19
CD40-202ENST00000372285 AFF2P51816 1311 aa22.49■■□□□ 1.19
CD40-202ENST00000372285 STARD3NLO95772 234 aa22.48■■□□□ 1.19
CD40-202ENST00000372285 SLC4A9Q96Q91 983 aa22.48■■□□□ 1.19
CD40-202ENST00000372285 C9orf78Q9NZ63 289 aaPredicted RBP22.48■■□□□ 1.19
CD40-202ENST00000372285 ATRNO75882 1429 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms