RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
TMEM53-202ENST00000372237 NUTM1Q86Y26 1132 aa23.26■■□□□ 1.31
TMEM53-202ENST00000372237 INTS4Q96HW7 963 aaKnown RBP23.25■■□□□ 1.31
TMEM53-202ENST00000372237 RBM27Q9P2N5 1060 aaKnown RBP23.25■■□□□ 1.31
TMEM53-202ENST00000372237 BRD1O95696 1058 aa23.24■■□□□ 1.31
TMEM53-202ENST00000372237 UPF3BQ9BZI7 483 aaKnown RBP23.24■■□□□ 1.31
TMEM53-202ENST00000372237 CEMIPQ8WUJ3 1361 aa23.23■■□□□ 1.31
TMEM53-202ENST00000372237 LTN1O94822 1766 aa23.23■■□□□ 1.31
TMEM53-202ENST00000372237 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
TMEM53-202ENST00000372237 POLA2Q14181 598 aa23.23■■□□□ 1.31
TMEM53-202ENST00000372237 RHPN1Q8TCX5 695 aa23.23■■□□□ 1.31
TMEM53-202ENST00000372237 SRGAP3O43295 1099 aa23.22■■□□□ 1.31
TMEM53-202ENST00000372237 EPB41L2O43491 1005 aaKnown RBP23.22■■□□□ 1.31
TMEM53-202ENST00000372237 IL17RAQ96F46 866 aa23.22■■□□□ 1.31
TMEM53-202ENST00000372237 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
TMEM53-202ENST00000372237 IL25Q9H293 177 aa23.22■■□□□ 1.31
TMEM53-202ENST00000372237 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
TMEM53-202ENST00000372237 PSME1Q06323 249 aa23.21■■□□□ 1.31
TMEM53-202ENST00000372237 TMEM63CQ9P1W3 806 aa23.21■■□□□ 1.31
TMEM53-202ENST00000372237 MAP4K4O95819 1239 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-202ENST00000372237 NBPF7P0C2Y1 421 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-202ENST00000372237 KIF1BPQ96EK5 621 aa23.21■■□□□ 1.31
TMEM53-202ENST00000372237 MBD3O95983 291 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 HSPA4P34932 840 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-202ENST00000372237 IP6K1Q92551 441 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 ZSCAN30Q86W11 494 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 PI4K2BQ8TCG2 481 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 DNAAF4Q8WXU2 420 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
TMEM53-202ENST00000372237 NSFL1CQ9UNZ2 370 aaKnown RBP23.2■■□□□ 1.3
TMEM53-202ENST00000372237 HOXB7P09629 217 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 ORAI2Q96SN7 254 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 LRSAM1Q6UWE0 723 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
TMEM53-202ENST00000372237 SYCE3A1L190 88 aa23.18■■□□□ 1.3
TMEM53-202ENST00000372237 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
TMEM53-202ENST00000372237 CNTROBQ8N137 903 aa23.17■■□□□ 1.3
TMEM53-202ENST00000372237 MED1Q15648 1581 aaPredicted RBP23.16■■□□□ 1.3
TMEM53-202ENST00000372237 MSNP26038 577 aaKnown RBP23.16■■□□□ 1.3
TMEM53-202ENST00000372237 TEFQ10587 303 aa23.16■■□□□ 1.3
TMEM53-202ENST00000372237 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
TMEM53-202ENST00000372237 SGSM2O43147 1006 aa23.16■■□□□ 1.3
TMEM53-202ENST00000372237 RAD50Q92878 1312 aa23.16■■□□□ 1.3
TMEM53-202ENST00000372237 KDM3BQ7LBC6 1761 aa23.15■■□□□ 1.3
TMEM53-202ENST00000372237 HSP90AB4PQ58FF6 505 aa23.15■■□□□ 1.3
TMEM53-202ENST00000372237 KCNQ3O43525 872 aa23.15■■□□□ 1.3
TMEM53-202ENST00000372237 BTBD11A6QL63 1104 aa23.14■■□□□ 1.3
TMEM53-202ENST00000372237 ANXA1P04083 346 aa23.14■■□□□ 1.29
TMEM53-202ENST00000372237 C19orf44Q9H6X5 657 aa23.14■■□□□ 1.29
TMEM53-202ENST00000372237 PDLIM2Q96JY6 352 aa23.13■■□□□ 1.29
TMEM53-202ENST00000372237 NFAT5O94916 1531 aa23.13■■□□□ 1.29
TMEM53-202ENST00000372237 OS9Q13438 667 aaPredicted RBP23.13■■□□□ 1.29
TMEM53-202ENST00000372237 HS1BP3Q53T59 392 aa23.13■■□□□ 1.29
TMEM53-202ENST00000372237 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
TMEM53-202ENST00000372237 ZNF530Q6P9A1 599 aaPredicted RBP23.13■■□□□ 1.29
TMEM53-202ENST00000372237 WDR33Q9C0J8 1336 aaKnown RBP23.12■■□□□ 1.29
TMEM53-202ENST00000372237 KIAA1211Q6ZU35 1233 aa23.12■■□□□ 1.29
TMEM53-202ENST00000372237 FOXD4L6Q3SYB3 417 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-202ENST00000372237 FOXD4L3Q6VB84 417 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-202ENST00000372237 SNX14Q9Y5W7 946 aa23.11■■□□□ 1.29
TMEM53-202ENST00000372237 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-202ENST00000372237 CWC27Q6UX04 472 aaKnown RBP23.11■■□□□ 1.29
TMEM53-202ENST00000372237 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
TMEM53-202ENST00000372237 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
TMEM53-202ENST00000372237 LSG1Q9H089 658 aaKnown RBP23.11■■□□□ 1.29
TMEM53-202ENST00000372237 ADCY9O60503 1353 aa23.11■■□□□ 1.29
TMEM53-202ENST00000372237 SYAP1Q96A49 352 aaPredicted RBP23.1■■□□□ 1.29
TMEM53-202ENST00000372237 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
TMEM53-202ENST00000372237 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
TMEM53-202ENST00000372237 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
TMEM53-202ENST00000372237 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
TMEM53-202ENST00000372237 TTC41PQ6P2S7 1318 aa23.1■■□□□ 1.29
TMEM53-202ENST00000372237 GLRX3O76003 335 aaKnown RBP23.09■■□□□ 1.29
TMEM53-202ENST00000372237 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
TMEM53-202ENST00000372237 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
TMEM53-202ENST00000372237 CLASRPQ8N2M8 674 aaKnown RBP23.08■■□□□ 1.29
TMEM53-202ENST00000372237 GDPD2Q9HCC8 539 aa23.08■■□□□ 1.29
TMEM53-202ENST00000372237 HSPA2P54652 639 aa23.08■■□□□ 1.28
TMEM53-202ENST00000372237 RASEFQ8IZ41 740 aa23.08■■□□□ 1.28
TMEM53-202ENST00000372237 TTC14Q96N46 770 aa23.08■■□□□ 1.28
TMEM53-202ENST00000372237 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.28
TMEM53-202ENST00000372237 SPG7Q9UQ90 795 aa23.08■■□□□ 1.28
TMEM53-202ENST00000372237 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
TMEM53-202ENST00000372237 AK2P54819 239 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 MTX1Q13505 466 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 DIAPH3Q9NSV4 1193 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 AMOTQ4VCS5 1084 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 C1orf141Q5JVX7 400 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 NOL7Q9UMY1 257 aaKnown RBP23.07■■□□□ 1.28
TMEM53-202ENST00000372237 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
TMEM53-202ENST00000372237 USP48Q86UV5 1035 aa23.06■■□□□ 1.28
TMEM53-202ENST00000372237 RNF214Q8ND24 703 aa23.06■■□□□ 1.28
TMEM53-202ENST00000372237 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms