RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RALBP1Q15311 655 aa25.11■■□□□ 1.61
TMEM53-201ENST00000372235 KIF13BQ9NQT8 1826 aa25.11■■□□□ 1.61
TMEM53-201ENST00000372235 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
TMEM53-201ENST00000372235 SRP68Q9UHB9 627 aaKnown RBP25.1■■□□□ 1.61
TMEM53-201ENST00000372235 FKBP8Q14318 412 aa25.09■■□□□ 1.61
TMEM53-201ENST00000372235 ZBTB1Q9Y2K1 713 aa25.09■■□□□ 1.61
TMEM53-201ENST00000372235 USPL1Q5W0Q7 1092 aa25.08■■□□□ 1.61
TMEM53-201ENST00000372235 SIPA1L3O60292 1781 aaPredicted RBP25.07■■□□□ 1.6
TMEM53-201ENST00000372235 PXDNLA1KZ92 1463 aa25.07■■□□□ 1.6
TMEM53-201ENST00000372235 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
TMEM53-201ENST00000372235 TM4SF1P30408 202 aa25.06■■□□□ 1.6
TMEM53-201ENST00000372235 IL6STP40189 918 aaPredicted RBP25.05■■□□□ 1.6
TMEM53-201ENST00000372235 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
TMEM53-201ENST00000372235 A0A0G2JLW4 131 aa25.03■■□□□ 1.6
TMEM53-201ENST00000372235 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
TMEM53-201ENST00000372235 PNISRQ8TF01 805 aaKnown RBP25.03■■□□□ 1.6
TMEM53-201ENST00000372235 PIM2Q9P1W9 311 aa25.03■■□□□ 1.6
TMEM53-201ENST00000372235 DDR1Q08345 913 aa25.02■■□□□ 1.6
TMEM53-201ENST00000372235 MCM10Q7L590 875 aa25.02■■□□□ 1.6
TMEM53-201ENST00000372235 BCS1LQ9Y276 419 aa25.02■■□□□ 1.6
TMEM53-201ENST00000372235 MAPK8IP3Q9UPT6 1336 aa25.02■■□□□ 1.6
TMEM53-201ENST00000372235 SNRPA1P09661 255 aaKnown RBP25.01■■□□□ 1.59
TMEM53-201ENST00000372235 DPEP1P16444 411 aa25.01■■□□□ 1.59
TMEM53-201ENST00000372235 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
TMEM53-201ENST00000372235 GIGYF1O75420 1035 aaPredicted RBP25■■□□□ 1.59
TMEM53-201ENST00000372235 NFIXQ14938 502 aa24.99■■□□□ 1.59
TMEM53-201ENST00000372235 GOLGB1Q14789 3259 aaKnown RBP24.99■■□□□ 1.59
TMEM53-201ENST00000372235 WWC3Q9ULE0 1092 aa24.98■■□□□ 1.59
TMEM53-201ENST00000372235 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
TMEM53-201ENST00000372235 DALRD3Q5D0E6 543 aaKnown RBP24.97■■□□□ 1.59
TMEM53-201ENST00000372235 PLEKHF1Q96S99 279 aa24.97■■□□□ 1.59
TMEM53-201ENST00000372235 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
TMEM53-201ENST00000372235 KIAA1551Q9HCM1 1747 aa24.97■■□□□ 1.59
TMEM53-201ENST00000372235 N4BP2Q86UW6 1770 aaPredicted RBP24.96■■□□□ 1.59
TMEM53-201ENST00000372235 SERPINB2P05120 415 aa24.96■■□□□ 1.59
TMEM53-201ENST00000372235 DDX10Q13206 875 aaKnown RBP24.96■■□□□ 1.59
TMEM53-201ENST00000372235 ZNF330Q9Y3S2 320 aaPredicted RBP24.96■■□□□ 1.59
TMEM53-201ENST00000372235 MYBBP1AQ9BQG0 1328 aaKnown RBP24.95■■□□□ 1.58
TMEM53-201ENST00000372235 C1QTNF8P60827 252 aa24.95■■□□□ 1.58
TMEM53-201ENST00000372235 BCL2L12Q9HB09 334 aa24.95■■□□□ 1.58
TMEM53-201ENST00000372235 GPBP1L1Q9HC44 474 aaPredicted RBP24.95■■□□□ 1.58
TMEM53-201ENST00000372235 ATP10DQ9P241 1426 aa24.95■■□□□ 1.58
TMEM53-201ENST00000372235 ADCY9O60503 1353 aa24.94■■□□□ 1.58
TMEM53-201ENST00000372235 KCNQ3O43525 872 aa24.94■■□□□ 1.58
TMEM53-201ENST00000372235 KCNA3P22001 575 aa24.94■■□□□ 1.58
TMEM53-201ENST00000372235 DCTN1Q14203 1278 aa24.94■■□□□ 1.58
TMEM53-201ENST00000372235 ARHGAP27Q6ZUM4 889 aa24.94■■□□□ 1.58
TMEM53-201ENST00000372235 RGL2O15211 777 aa24.93■■□□□ 1.58
TMEM53-201ENST00000372235 A1BGP04217 495 aa24.93■■□□□ 1.58
TMEM53-201ENST00000372235 ZNF652Q9Y2D9 606 aa24.93■■□□□ 1.58
TMEM53-201ENST00000372235 CLEC4GQ6UXB4 293 aa24.92■■□□□ 1.58
TMEM53-201ENST00000372235 TBC1D2BQ9UPU7 963 aa24.92■■□□□ 1.58
TMEM53-201ENST00000372235 USP16Q9Y5T5 823 aa24.92■■□□□ 1.58
TMEM53-201ENST00000372235 CARMIL3Q8ND23 1372 aa24.92■■□□□ 1.58
TMEM53-201ENST00000372235 LMOD3Q0VAK6 560 aa24.91■■□□□ 1.58
TMEM53-201ENST00000372235 DZIP3Q86Y13 1208 aaKnown RBP24.91■■□□□ 1.58
TMEM53-201ENST00000372235 SETDB2Q96T68 719 aa24.91■■□□□ 1.58
TMEM53-201ENST00000372235 BRCA1P38398 1863 aaKnown RBP24.9■■□□□ 1.58
TMEM53-201ENST00000372235 NRXN2Q9P2S2 1712 aa24.9■■□□□ 1.58
TMEM53-201ENST00000372235 H0YIN7 160 aa24.89■■□□□ 1.58
TMEM53-201ENST00000372235 PDE6BP35913 854 aa24.89■■□□□ 1.58
TMEM53-201ENST00000372235 BICDL1Q6ZP65 573 aa24.89■■□□□ 1.58
TMEM53-201ENST00000372235 ARFGEF1Q9Y6D6 1849 aa24.89■■□□□ 1.57
TMEM53-201ENST00000372235 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
TMEM53-201ENST00000372235 NPHP1O15259 732 aa24.88■■□□□ 1.57
TMEM53-201ENST00000372235 TBC1D9BQ66K14 1250 aa24.88■■□□□ 1.57
TMEM53-201ENST00000372235 BABAM1Q9NWV8 329 aa24.88■■□□□ 1.57
TMEM53-201ENST00000372235 CAMTA2O94983 1202 aa24.87■■□□□ 1.57
TMEM53-201ENST00000372235 CHRNA5P30532 468 aa24.87■■□□□ 1.57
TMEM53-201ENST00000372235 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
TMEM53-201ENST00000372235 BRIP1Q9BX63 1249 aa24.87■■□□□ 1.57
TMEM53-201ENST00000372235 AFDNP55196 1824 aaKnown RBP24.86■■□□□ 1.57
TMEM53-201ENST00000372235 ST5P78524 1137 aa24.85■■□□□ 1.57
TMEM53-201ENST00000372235 WDR43Q15061 677 aaKnown RBP eCLIP24.85■■□□□ 1.57
TMEM53-201ENST00000372235 C2CD5Q86YS7 1000 aa24.85■■□□□ 1.57
TMEM53-201ENST00000372235 TTLL6Q8N841 843 aa24.85■■□□□ 1.57
TMEM53-201ENST00000372235 DLG5Q8TDM6 1919 aa24.84■■□□□ 1.57
TMEM53-201ENST00000372235 RIPK4P57078 832 aa24.84■■□□□ 1.57
TMEM53-201ENST00000372235 CNBD1Q8NA66 436 aa24.84■■□□□ 1.57
TMEM53-201ENST00000372235 PRAMEF22A3QJZ6 481 aa24.82■■□□□ 1.56
TMEM53-201ENST00000372235 EIF4A1P60842 406 aaKnown RBP24.82■■□□□ 1.56
TMEM53-201ENST00000372235 MIS18AQ9NYP9 233 aa24.82■■□□□ 1.56
TMEM53-201ENST00000372235 PRR5LQ6MZQ0 368 aa24.81■■□□□ 1.56
TMEM53-201ENST00000372235 ZNF526Q8TF50 670 aaPredicted RBP24.81■■□□□ 1.56
TMEM53-201ENST00000372235 TMPOP42166 694 aaKnown RBP24.8■■□□□ 1.56
TMEM53-201ENST00000372235 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
TMEM53-201ENST00000372235 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
TMEM53-201ENST00000372235 BCORQ6W2J9 1755 aa24.8■■□□□ 1.56
TMEM53-201ENST00000372235 KDM3BQ7LBC6 1761 aa24.8■■□□□ 1.56
TMEM53-201ENST00000372235 C9orf131Q5VYM1 1079 aa24.79■■□□□ 1.56
TMEM53-201ENST00000372235 TPTE2Q6XPS3 522 aa24.79■■□□□ 1.56
TMEM53-201ENST00000372235 NBPF5PQ86XG9 351 aaPredicted RBP24.79■■□□□ 1.56
TMEM53-201ENST00000372235 RUNDC1Q96C34 613 aa24.79■■□□□ 1.56
TMEM53-201ENST00000372235 LAMB4A4D0S4 1761 aa24.79■■□□□ 1.56
TMEM53-201ENST00000372235 ZC3H4Q9UPT8 1303 aaKnown RBP24.79■■□□□ 1.56
TMEM53-201ENST00000372235 DLEC1Q9Y238 1755 aa24.78■■□□□ 1.56
TMEM53-201ENST00000372235 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
TMEM53-201ENST00000372235 NBPF26B4DH59 902 aa24.78■■□□□ 1.56
TMEM53-201ENST00000372235 ERVV-1B6SEH8 477 aa24.78■■□□□ 1.56
TMEM53-201ENST00000372235 NBPF10Q6P3W6 841 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms