RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 FOSBP53539 338 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 ATP10AO60312 1499 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 MPHOSPH10O00566 681 aaKnown RBP16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 RFC4P35249 363 aa16.41■□□□□ 0.22
RAPGEF1-202ENST00000372190 PSMA5P28066 241 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 MAGEC2Q9UBF1 373 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 RNF168Q8IYW5 571 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 DDX23Q9BUQ8 820 aaKnown RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 LRRFIP2Q9Y608 721 aaKnown RBP16.4■□□□□ 0.22
RAPGEF1-202ENST00000372190 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 PPFIBP1Q86W92 1011 aa16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 MYD88Q99836 296 aa16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 FKBP4Q02790 459 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 NAP1L3Q99457 506 aaPredicted RBP16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 IVLP07476 585 aa16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 ACSBG1Q96GR2 724 aa16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
RAPGEF1-202ENST00000372190 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 A0A087WZG4 1122 aa16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 KDM4AO75164 1064 aa16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 DDB1Q16531 1140 aa16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 GTPBP4Q9BZE4 634 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-202ENST00000372190 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 LIG1P18858 919 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 SYCP1Q15431 976 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 TTC31Q49AM3 519 aaPredicted RBP16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 CBFA2T2O43439 604 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 HSPA4P34932 840 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 CAVIN4Q5BKX8 364 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
RAPGEF1-202ENST00000372190 CCDC160A6NGH7 325 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 FEZ1Q99689 392 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 AACSQ86V21 672 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 SERPINC1P01008 464 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 CABLES1Q8TDN4 633 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 BACH2Q9BYV9 841 aa16.36■□□□□ 0.21
RAPGEF1-202ENST00000372190 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 MIPOL1Q8TD10 442 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 GCC1Q96CN9 775 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 NSD2O96028 1365 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 ST5P78524 1137 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 ZNF622Q969S3 477 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 FAM177A1Q8N128 213 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
RAPGEF1-202ENST00000372190 ZFYP08048 801 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF1-202ENST00000372190 LMAN1P49257 510 aa16.34■□□□□ 0.21
RAPGEF1-202ENST00000372190 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF1-202ENST00000372190 TTLL12Q14166 644 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF1-202ENST00000372190 SEPT14Q6ZU15 432 aa16.34■□□□□ 0.21
RAPGEF1-202ENST00000372190 WDR97A6NE52 1622 aa16.33■□□□□ 0.21
RAPGEF1-202ENST00000372190 BCAR3O75815 825 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 MCM2P49736 904 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 DYNC1I1O14576 645 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 MYZAPP0CAP1 466 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 TMEM132AQ24JP5 1023 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 A0A1B0GUA9 196 aa16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 RSRC1Q96IZ7 334 aaKnown RBP16.33■□□□□ 0.2
RAPGEF1-202ENST00000372190 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms