RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TXLNAP40222 546 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 SMARCE1Q969G3 411 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 CWC27Q6UX04 472 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 WWC2Q6AWC2 1192 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
RAPGEF1-201ENST00000372189 CCDC112Q8NEF3 446 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 LRRC59Q96AG4 307 aaKnown RBP15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 EPS15P42566 896 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 EXOC6BQ9Y2D4 811 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 USP5P45974 858 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 MRVI1Q9Y6F6 885 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 ACSBG1Q96GR2 724 aa15.62■□□□□ 0.09
RAPGEF1-201ENST00000372189 STK3Q13188 491 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 DDB1Q16531 1140 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 ZNF287Q9HBT7 754 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 MPHOSPH10O00566 681 aaKnown RBP15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 F6X3S4 739 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 ARID4AP29374 1257 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 PTPRCP08575 1304 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 ST5P78524 1137 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 CWC25Q9NXE8 425 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF1-201ENST00000372189 CABLES1Q8TDN4 633 aa15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 RARSP54136 660 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 IMMTQ16891 758 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 NKTRP30414 1462 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 KRT18P05783 430 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 SMARCC1Q92922 1105 aaPredicted RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 FLIIQ13045 1269 aa15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 CRACR2BQ8N4Y2 399 aaPredicted RBP15.6■□□□□ 0.09
RAPGEF1-201ENST00000372189 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 ATP6V1AP38606 617 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 RALGAPBQ86X10 1494 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 CFAP43Q8NDM7 1665 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 CDKL5O76039 1030 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 KRT32Q14532 448 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 TNMDQ9H2S6 317 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 MYO6Q9UM54 1294 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 KCNA6P17658 529 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 SLF2Q8IX21 1173 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 TRPM2O94759 1503 aa15.59■□□□□ 0.09
RAPGEF1-201ENST00000372189 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.09
RAPGEF1-201ENST00000372189 C6orf229H3BNL8 230 aa15.58■□□□□ 0.09
RAPGEF1-201ENST00000372189 IL2RBP14784 551 aa15.58■□□□□ 0.09
RAPGEF1-201ENST00000372189 FBLN1P23142 703 aa15.58■□□□□ 0.09
RAPGEF1-201ENST00000372189 ABCC1P33527 1531 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 TTLL5Q6EMB2 1281 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 IPO4Q8TEX9 1081 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 MAP3K12Q12852 859 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 STK38Q15208 465 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 MX1P20591 662 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 ATP7AQ04656 1500 aa15.58■□□□□ 0.08
RAPGEF1-201ENST00000372189 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 GTF2A1P52655 376 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 PDRG1Q9NUG6 133 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 PIK3R4Q99570 1358 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 OFD1O75665 1012 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 MBIPQ9NS73 344 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 NBPF5PQ86XG9 351 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
RAPGEF1-201ENST00000372189 KRT85P78386 507 aa15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 JAKMIP1Q96N16 626 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 NOL7Q9UMY1 257 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 BOLA2Q9H3K6 86 aa15.56■□□□□ 0.08
RAPGEF1-201ENST00000372189 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 CT47A1Q5JQC4 288 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 WDHD1O75717 1129 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 SERPINC1P01008 464 aa15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 SARNPP82979 210 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 MAGEC2Q9UBF1 373 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF1-201ENST00000372189 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms