RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 STMN4Q9H169 189 aaPredicted RBP17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 IGSF3O75054 1194 aa17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 ZMAT2Q96NC0 199 aaKnown RBP17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 NOP2P46087 812 aaKnown RBP17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 GNG11P61952 73 aa17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 TTC16Q8NEE8 873 aa17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 EPSTI1Q96J88 318 aa17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 STX1AQ16623 288 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 SELENOSQ9BQE4 189 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 CPLX4Q7Z7G2 160 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 FGFR1OPO95684 399 aaKnown RBP17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 LMNTD2Q8IXW0 634 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 EHBP1Q8NDI1 1231 aa17.63■□□□□ 0.41
GTF3C4-201ENST00000372146 ARL1P40616 181 aaPredicted RBP17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 DDX27Q96GQ7 796 aaKnown RBP17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 TTC14Q96N46 770 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 HMOX1P09601 288 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 WDR63Q8IWG1 891 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 UACAQ9BZF9 1416 aa17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 CWC27Q6UX04 472 aaKnown RBP17.62■□□□□ 0.41
GTF3C4-201ENST00000372146 DDX12PQ92771 950 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 CASQ2O14958 399 aaPredicted RBP17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 KIAA0753Q2KHM9 967 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 SMAP1Q8IYB5 467 aaPredicted RBP17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 VCX3BQ9H321 246 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 GNAI2P04899 355 aa17.61■□□□□ 0.41
GTF3C4-201ENST00000372146 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 TSPYL2Q9H2G4 693 aaPredicted RBP17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 SAMD15Q9P1V8 674 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 BANK1Q8NDB2 785 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 SH2D4BQ5SQS7 431 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 CEP85LQ5SZL2 805 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 ZNF76P36508 570 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 PRR16Q569H4 304 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 CTAGE6Q86UF2 777 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 WASF1Q92558 559 aa17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
GTF3C4-201ENST00000372146 CTAGE5O15320 804 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 CCDC63Q8NA47 563 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 DNAI2Q9GZS0 605 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 RASAL2Q9UJF2 1139 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 UBA5Q9GZZ9 404 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 PABPN1LA6NDY0 278 aaKnown RBP17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 CIB2O75838 187 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 ZNF830Q96NB3 372 aaPredicted RBP17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 NACAP1Q9BZK3 213 aa17.59■□□□□ 0.41
GTF3C4-201ENST00000372146 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.41
GTF3C4-201ENST00000372146 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
GTF3C4-201ENST00000372146 GTF3C6Q969F1 213 aa17.58■□□□□ 0.41
GTF3C4-201ENST00000372146 GOLGA1Q92805 767 aa17.58■□□□□ 0.4
GTF3C4-201ENST00000372146 PRC1O43663 620 aa17.58■□□□□ 0.4
GTF3C4-201ENST00000372146 MAP2K2P36507 400 aa17.58■□□□□ 0.4
GTF3C4-201ENST00000372146 SIL1Q9H173 461 aa17.58■□□□□ 0.4
GTF3C4-201ENST00000372146 WHAMMP3Q1A5X7 153 aa17.58■□□□□ 0.4
GTF3C4-201ENST00000372146 B4GALNT4Q76KP1 1039 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 PLEKHH1Q9ULM0 1364 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 CHD1LQ86WJ1 897 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 GNAI3P08754 354 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 SETDB1Q15047 1291 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 FAM76AQ8TAV0 307 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 PPFIBP2Q8ND30 876 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 PHACTR2O75167 634 aa17.57■□□□□ 0.4
GTF3C4-201ENST00000372146 CCDC50Q8IVM0 306 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 MORC4Q8TE76 937 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 MYO1BO43795 1136 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 SSX2IPQ9Y2D8 614 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 FERMT2Q96AC1 680 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 CLCN1P35523 988 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 FERMT3Q86UX7 667 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 OGFRQ9NZT2 677 aa17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
GTF3C4-201ENST00000372146 GCKP35557 465 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 STMN1P16949 149 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 SATB1Q01826 763 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 TSNAXIP1Q2TAA8 658 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 TNPO1Q92973 898 aaKnown RBP17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 IFT74Q96LB3 600 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms