RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 TBC1D2Q9BYX2 928 aa24.57■■□□□ 1.52
LHX3-202ENST00000371748 CDC45O75419 566 aa24.57■■□□□ 1.52
LHX3-202ENST00000371748 C5P01031 1676 aa24.56■■□□□ 1.52
LHX3-202ENST00000371748 NBPF7P0C2Y1 421 aaPredicted RBP24.55■■□□□ 1.52
LHX3-202ENST00000371748 ABCA3Q99758 1704 aa24.53■■□□□ 1.52
LHX3-202ENST00000371748 RBM25P49756 843 aaKnown RBP24.53■■□□□ 1.52
LHX3-202ENST00000371748 MAP3K2Q9Y2U5 619 aa24.53■■□□□ 1.52
LHX3-202ENST00000371748 DCAF5Q96JK2 942 aa24.53■■□□□ 1.52
LHX3-202ENST00000371748 WDR17Q8IZU2 1322 aa24.53■■□□□ 1.52
LHX3-202ENST00000371748 TOM1L2Q6ZVM7 507 aa24.52■■□□□ 1.52
LHX3-202ENST00000371748 LRRCC1Q9C099 1032 aa24.52■■□□□ 1.52
LHX3-202ENST00000371748 IBTKQ9P2D0 1353 aaPredicted RBP24.52■■□□□ 1.52
LHX3-202ENST00000371748 HYPKQ9NX55 129 aa24.51■■□□□ 1.51
LHX3-202ENST00000371748 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
LHX3-202ENST00000371748 SDSP20132 328 aa24.51■■□□□ 1.51
LHX3-202ENST00000371748 PPP1R42Q7Z4L9 355 aa24.51■■□□□ 1.51
LHX3-202ENST00000371748 COL5A2P05997 1499 aaPredicted RBP24.5■■□□□ 1.51
LHX3-202ENST00000371748 MRC1P22897 1456 aa24.5■■□□□ 1.51
LHX3-202ENST00000371748 PDIA6Q15084 440 aa24.5■■□□□ 1.51
LHX3-202ENST00000371748 KSR2Q6VAB6 950 aa24.5■■□□□ 1.51
LHX3-202ENST00000371748 ZNF496Q96IT1 587 aaPredicted RBP24.5■■□□□ 1.51
LHX3-202ENST00000371748 SLKQ9H2G2 1235 aaPredicted RBP24.5■■□□□ 1.51
LHX3-202ENST00000371748 DDX21Q9NR30 783 aaKnown RBP eCLIP24.5■■□□□ 1.51
LHX3-202ENST00000371748 PDE1AP54750 535 aa24.5■■□□□ 1.51
LHX3-202ENST00000371748 AIMP1Q12904 312 aaKnown RBP24.5■■□□□ 1.51
LHX3-202ENST00000371748 SSH3Q8TE77 659 aa24.5■■□□□ 1.51
LHX3-202ENST00000371748 PARP4Q9UKK3 1724 aaKnown RBP24.49■■□□□ 1.51
LHX3-202ENST00000371748 NHSL1Q5SYE7 1610 aa24.48■■□□□ 1.51
LHX3-202ENST00000371748 TSHZ3Q63HK5 1081 aa24.48■■□□□ 1.51
LHX3-202ENST00000371748 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
LHX3-202ENST00000371748 TTC5Q8N0Z6 440 aa24.47■■□□□ 1.51
LHX3-202ENST00000371748 OSBPL3Q9H4L5 887 aa24.47■■□□□ 1.51
LHX3-202ENST00000371748 SRGAP3O43295 1099 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 MYL6BP14649 208 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 CABP4P57796 275 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 CWF19L2Q2TBE0 894 aaKnown RBP24.46■■□□□ 1.51
LHX3-202ENST00000371748 SALL3Q9BXA9 1300 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 POLA2Q14181 598 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 STRN4Q9NRL3 753 aa24.46■■□□□ 1.51
LHX3-202ENST00000371748 SPRYD3Q8NCJ5 442 aa24.45■■□□□ 1.51
LHX3-202ENST00000371748 C9orf78Q9NZ63 289 aaPredicted RBP24.45■■□□□ 1.5
LHX3-202ENST00000371748 SURF6O75683 361 aaKnown RBP24.44■■□□□ 1.5
LHX3-202ENST00000371748 ALDH1L1O75891 902 aa24.44■■□□□ 1.5
LHX3-202ENST00000371748 ZCRB1Q8TBF4 217 aaKnown RBP24.44■■□□□ 1.5
LHX3-202ENST00000371748 KIF2CQ99661 725 aa24.44■■□□□ 1.5
LHX3-202ENST00000371748 DDX58O95786 925 aaKnown RBP24.44■■□□□ 1.5
LHX3-202ENST00000371748 IL1RAPL2Q9NP60 686 aa24.44■■□□□ 1.5
LHX3-202ENST00000371748 USP16Q9Y5T5 823 aa24.44■■□□□ 1.5
LHX3-202ENST00000371748 MX1P20591 662 aa24.43■■□□□ 1.5
LHX3-202ENST00000371748 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
LHX3-202ENST00000371748 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
LHX3-202ENST00000371748 SNRPA1P09661 255 aaKnown RBP24.43■■□□□ 1.5
LHX3-202ENST00000371748 TUBGCP6Q96RT7 1819 aa24.42■■□□□ 1.5
LHX3-202ENST00000371748 PIP4K2AP48426 406 aaPredicted RBP24.42■■□□□ 1.5
LHX3-202ENST00000371748 LARP1Q6PKG0 1096 aaKnown RBP24.42■■□□□ 1.5
LHX3-202ENST00000371748 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
LHX3-202ENST00000371748 ANTXR1Q9H6X2 564 aa24.42■■□□□ 1.5
LHX3-202ENST00000371748 HSCBQ8IWL3 235 aa24.41■■□□□ 1.5
LHX3-202ENST00000371748 EVA1CP58658 441 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 RIC3Q7Z5B4 369 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 LINS1Q8NG48 757 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 XAGE3Q8WTP9 111 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 CARD10Q9BWT7 1032 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 IL2RBP14784 551 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 CASC1Q6TDU7 716 aa24.4■■□□□ 1.5
LHX3-202ENST00000371748 RAB11FIP3O75154 756 aa24.39■■□□□ 1.5
LHX3-202ENST00000371748 COPS6Q7L5N1 327 aa24.39■■□□□ 1.5
LHX3-202ENST00000371748 RHPN1Q8TCX5 695 aa24.38■■□□□ 1.49
LHX3-202ENST00000371748 SHANK3Q9BYB0 1731 aa24.38■■□□□ 1.49
LHX3-202ENST00000371748 NUTM1Q86Y26 1132 aa24.38■■□□□ 1.49
LHX3-202ENST00000371748 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
LHX3-202ENST00000371748 GLI3P10071 1580 aa24.38■■□□□ 1.49
LHX3-202ENST00000371748 IGKV5-2P06315 115 aa24.37■■□□□ 1.49
LHX3-202ENST00000371748 GRM8O00222 908 aa24.37■■□□□ 1.49
LHX3-202ENST00000371748 EIF5BO60841 1220 aaKnown RBP24.37■■□□□ 1.49
LHX3-202ENST00000371748 LRP10Q7Z4F1 713 aa24.37■■□□□ 1.49
LHX3-202ENST00000371748 RBM42Q9BTD8 480 aaKnown RBP24.37■■□□□ 1.49
LHX3-202ENST00000371748 STAP2Q9UGK3 403 aa24.37■■□□□ 1.49
LHX3-202ENST00000371748 PRKCSHP14314 528 aaPredicted RBP24.36■■□□□ 1.49
LHX3-202ENST00000371748 MTX1Q13505 466 aa24.36■■□□□ 1.49
LHX3-202ENST00000371748 SNX21Q969T3 373 aa24.36■■□□□ 1.49
LHX3-202ENST00000371748 USP26Q9BXU7 913 aa24.36■■□□□ 1.49
LHX3-202ENST00000371748 KIF1BPQ96EK5 621 aa24.35■■□□□ 1.49
LHX3-202ENST00000371748 SUCLG2Q96I99 432 aa24.35■■□□□ 1.49
LHX3-202ENST00000371748 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.35■■□□□ 1.49
LHX3-202ENST00000371748 LAMB4A4D0S4 1761 aa24.35■■□□□ 1.49
LHX3-202ENST00000371748 TRIM6-TRIM34B2RNG4 842 aa24.34■■□□□ 1.49
LHX3-202ENST00000371748 MYD88Q99836 296 aa24.34■■□□□ 1.49
LHX3-202ENST00000371748 NEXNQ0ZGT2 675 aa24.34■■□□□ 1.49
LHX3-202ENST00000371748 RILPL2Q969X0 211 aa24.34■■□□□ 1.49
LHX3-202ENST00000371748 KAZALD1Q96I82 304 aa24.34■■□□□ 1.49
LHX3-202ENST00000371748 UTYO14607 1347 aa24.33■■□□□ 1.49
LHX3-202ENST00000371748 CD2BP2O95400 341 aaKnown RBP24.33■■□□□ 1.49
LHX3-202ENST00000371748 OS9Q13438 667 aaPredicted RBP24.33■■□□□ 1.49
LHX3-202ENST00000371748 ANKRD13DQ6ZTN6 518 aa24.33■■□□□ 1.49
LHX3-202ENST00000371748 NEURL1BA8MQ27 555 aa24.32■■□□□ 1.48
LHX3-202ENST00000371748 ERVV-2B6SEH9 535 aa24.32■■□□□ 1.48
LHX3-202ENST00000371748 METTL22Q9BUU2 404 aaPredicted RBP24.32■■□□□ 1.48
LHX3-202ENST00000371748 PA2G4Q9UQ80 394 aaKnown RBP24.32■■□□□ 1.48
LHX3-202ENST00000371748 HDAC5Q9UQL6 1122 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms