RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 HYPKQ9NX55 129 aa28.44■■■□□ 2.14
TTC39A-203ENST00000371747 USP44Q9H0E7 712 aa28.43■■■□□ 2.14
TTC39A-203ENST00000371747 DDX21Q9NR30 783 aaKnown RBP eCLIP28.43■■■□□ 2.14
TTC39A-203ENST00000371747 JCADQ9P266 1359 aa28.42■■■□□ 2.14
TTC39A-203ENST00000371747 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
TTC39A-203ENST00000371747 HMMRO75330 724 aa28.42■■■□□ 2.14
TTC39A-203ENST00000371747 PDIA6Q15084 440 aa28.42■■■□□ 2.14
TTC39A-203ENST00000371747 BEND3Q5T5X7 828 aa28.42■■■□□ 2.14
TTC39A-203ENST00000371747 DDX54Q8TDD1 881 aaKnown RBP28.41■■■□□ 2.14
TTC39A-203ENST00000371747 FMNL2Q96PY5 1086 aa28.41■■■□□ 2.14
TTC39A-203ENST00000371747 SNRPA1P09661 255 aaKnown RBP28.4■■■□□ 2.14
TTC39A-203ENST00000371747 SEC24BO95487 1268 aa28.38■■■□□ 2.13
TTC39A-203ENST00000371747 KSR2Q6VAB6 950 aa28.38■■■□□ 2.13
TTC39A-203ENST00000371747 NRAPQ86VF7 1730 aa28.38■■■□□ 2.13
TTC39A-203ENST00000371747 UBTFL1P0CB47 393 aaPredicted RBP28.38■■■□□ 2.13
TTC39A-203ENST00000371747 MAP3K2Q9Y2U5 619 aa28.37■■■□□ 2.13
TTC39A-203ENST00000371747 LRRFIP2Q9Y608 721 aaKnown RBP28.37■■■□□ 2.13
TTC39A-203ENST00000371747 ATP8B2P98198 1209 aa28.36■■■□□ 2.13
TTC39A-203ENST00000371747 USP16Q9Y5T5 823 aa28.36■■■□□ 2.13
TTC39A-203ENST00000371747 GLI3P10071 1580 aa28.35■■■□□ 2.13
TTC39A-203ENST00000371747 HSPA1LP34931 641 aa28.34■■■□□ 2.13
TTC39A-203ENST00000371747 SLIT2O94813 1529 aa28.34■■■□□ 2.13
TTC39A-203ENST00000371747 DISP2A7MBM2 1401 aa28.34■■■□□ 2.13
TTC39A-203ENST00000371747 DDX58O95786 925 aaKnown RBP28.34■■■□□ 2.13
TTC39A-203ENST00000371747 ZBTB47Q9UFB7 747 aaPredicted RBP28.34■■■□□ 2.13
TTC39A-203ENST00000371747 PNMA6EA0A0J9YXQ4 647 aa28.32■■■□□ 2.12
TTC39A-203ENST00000371747 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
TTC39A-203ENST00000371747 NWD2Q9ULI1 1742 aa28.32■■■□□ 2.12
TTC39A-203ENST00000371747 ALDH1L1O75891 902 aa28.32■■■□□ 2.12
TTC39A-203ENST00000371747 MYL6BP14649 208 aa28.32■■■□□ 2.12
TTC39A-203ENST00000371747 BMP2KLQ5H9B9 411 aa28.32■■■□□ 2.12
TTC39A-203ENST00000371747 UBR2Q8IWV8 1755 aa28.31■■■□□ 2.12
TTC39A-203ENST00000371747 PAPPAQ13219 1627 aa28.31■■■□□ 2.12
TTC39A-203ENST00000371747 NBPF7P0C2Y1 421 aaPredicted RBP28.31■■■□□ 2.12
TTC39A-203ENST00000371747 LAMB4A4D0S4 1761 aa28.3■■■□□ 2.12
TTC39A-203ENST00000371747 TOGARAM1Q9Y4F4 1720 aa28.3■■■□□ 2.12
TTC39A-203ENST00000371747 LRP10Q7Z4F1 713 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 PLEKHM2Q8IWE5 1019 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 SPATA31A1Q5TZJ5 1347 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 APBB1O00213 710 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 XAGE3Q8WTP9 111 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
TTC39A-203ENST00000371747 SMARCA5O60264 1052 aaPredicted RBP28.28■■■□□ 2.12
TTC39A-203ENST00000371747 C16orf71Q8IYS4 520 aaPredicted RBP28.28■■■□□ 2.12
TTC39A-203ENST00000371747 NOP58Q9Y2X3 529 aaKnown RBP28.28■■■□□ 2.12
TTC39A-203ENST00000371747 KCPQ6ZWJ8 1503 aa28.28■■■□□ 2.12
TTC39A-203ENST00000371747 COPS6Q7L5N1 327 aa28.27■■■□□ 2.12
TTC39A-203ENST00000371747 LINS1Q8NG48 757 aa28.27■■■□□ 2.12
TTC39A-203ENST00000371747 DDRGK1Q96HY6 314 aa28.27■■■□□ 2.12
TTC39A-203ENST00000371747 C8orf37Q96NL8 207 aa28.27■■■□□ 2.12
TTC39A-203ENST00000371747 WNK3Q9BYP7 1800 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 LRP6O75581 1613 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 RIC3Q7Z5B4 369 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 SSH3Q8TE77 659 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 EXOC6BQ9Y2D4 811 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 TNS2Q63HR2 1409 aa28.26■■■□□ 2.11
TTC39A-203ENST00000371747 CWF19L2Q2TBE0 894 aaKnown RBP28.25■■■□□ 2.11
TTC39A-203ENST00000371747 NGLY1Q96IV0 654 aa28.25■■■□□ 2.11
TTC39A-203ENST00000371747 SPATA31A5Q5VU36 1347 aa28.25■■■□□ 2.11
TTC39A-203ENST00000371747 SPATA31A7Q8IWB4 1347 aa28.25■■■□□ 2.11
TTC39A-203ENST00000371747 PIP4K2AP48426 406 aaPredicted RBP28.25■■■□□ 2.11
TTC39A-203ENST00000371747 TMOD3Q9NYL9 352 aa28.25■■■□□ 2.11
TTC39A-203ENST00000371747 UNC5CLQ8IV45 518 aa28.24■■■□□ 2.11
TTC39A-203ENST00000371747 UPF2Q9HAU5 1272 aaKnown RBP28.24■■■□□ 2.11
TTC39A-203ENST00000371747 PPP1R42Q7Z4L9 355 aa28.23■■■□□ 2.11
TTC39A-203ENST00000371747 BCL11AQ9H165 835 aa28.23■■■□□ 2.11
TTC39A-203ENST00000371747 C9orf78Q9NZ63 289 aaPredicted RBP28.23■■■□□ 2.11
TTC39A-203ENST00000371747 THRAP3Q9Y2W1 955 aaKnown RBP28.23■■■□□ 2.11
TTC39A-203ENST00000371747 ERBB4Q15303 1308 aa28.23■■■□□ 2.11
TTC39A-203ENST00000371747 POLA2Q14181 598 aa28.23■■■□□ 2.11
TTC39A-203ENST00000371747 OTUD7AQ8TE49 926 aaPredicted RBP28.23■■■□□ 2.11
TTC39A-203ENST00000371747 BCL9LQ86UU0 1499 aa28.23■■■□□ 2.11
TTC39A-203ENST00000371747 IBTKQ9P2D0 1353 aaPredicted RBP28.22■■■□□ 2.11
TTC39A-203ENST00000371747 PTCD1O75127 700 aaKnown RBP28.22■■■□□ 2.11
TTC39A-203ENST00000371747 ERICH6Q7L0X2 663 aa28.22■■■□□ 2.11
TTC39A-203ENST00000371747 EXOC5O00471 708 aa28.21■■■□□ 2.11
TTC39A-203ENST00000371747 ANKRD13DQ6ZTN6 518 aa28.21■■■□□ 2.11
TTC39A-203ENST00000371747 FNBP4Q8N3X1 1017 aaPredicted RBP28.21■■■□□ 2.11
TTC39A-203ENST00000371747 IGKV5-2P06315 115 aa28.21■■■□□ 2.11
TTC39A-203ENST00000371747 METTL22Q9BUU2 404 aaPredicted RBP28.21■■■□□ 2.11
TTC39A-203ENST00000371747 GSPT1P15170 499 aaKnown RBP28.2■■■□□ 2.1
TTC39A-203ENST00000371747 LRRCC1Q9C099 1032 aa28.2■■■□□ 2.1
TTC39A-203ENST00000371747 UTYO14607 1347 aa28.2■■■□□ 2.1
TTC39A-203ENST00000371747 NEXNQ0ZGT2 675 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 TTC22Q5TAA0 569 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 PIGBQ92521 554 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 TBC1D32Q96NH3 1257 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 HDAC5Q9UQL6 1122 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 NBPF26B4DH59 902 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 GRM8O00222 908 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 SRGAP3O43295 1099 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 NBPF14Q5TI25 921 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 NBPF10Q6P3W6 841 aaKnown RBP28.19■■■□□ 2.1
TTC39A-203ENST00000371747 NBPF15Q8N660 670 aa28.19■■■□□ 2.1
TTC39A-203ENST00000371747 CCDC9Q9Y3X0 531 aaKnown RBP28.19■■■□□ 2.1
TTC39A-203ENST00000371747 ITGB4P16144 1822 aa28.18■■■□□ 2.1
TTC39A-203ENST00000371747 CDCA7Q9BWT1 371 aaPredicted RBP28.18■■■□□ 2.1
TTC39A-203ENST00000371747 MTX1Q13505 466 aa28.17■■■□□ 2.1
TTC39A-203ENST00000371747 MYD88Q99836 296 aa28.17■■■□□ 2.1
TTC39A-203ENST00000371747 NEURL1BA8MQ27 555 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms