RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
PTPN1-201ENST00000371621 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
PTPN1-201ENST00000371621 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
PTPN1-201ENST00000371621 LIMCH1Q9UPQ0 1083 aa13.76□□□□□ -0.21
PTPN1-201ENST00000371621 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 EFCC1Q9HA90 598 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 FEZ2Q9UHY8 353 aaPredicted RBP13.75□□□□□ -0.21
PTPN1-201ENST00000371621 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 STK38Q15208 465 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 RHOXF2BP0C7M4 288 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 SYT1P21579 422 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
PTPN1-201ENST00000371621 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 RHOXF2Q9BQY4 288 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 DAPK1P53355 1430 aa13.75□□□□□ -0.21
PTPN1-201ENST00000371621 NEBLO76041 1014 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
PTPN1-201ENST00000371621 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
PTPN1-201ENST00000371621 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
PTPN1-201ENST00000371621 CBX8Q9HC52 389 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 F13A1P00488 732 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 LIG3P49916 1009 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 SARNPP82979 210 aaKnown RBP13.74□□□□□ -0.21
PTPN1-201ENST00000371621 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
PTPN1-201ENST00000371621 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
PTPN1-201ENST00000371621 MAGI3Q5TCQ9 1506 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
PTPN1-201ENST00000371621 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 CPLX1O14810 134 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
PTPN1-201ENST00000371621 PCMTD1Q96MG8 357 aaPredicted RBP13.73□□□□□ -0.21
PTPN1-201ENST00000371621 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
PTPN1-201ENST00000371621 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
PTPN1-201ENST00000371621 DDX19AQ9NUU7 478 aaKnown RBP13.73□□□□□ -0.21
PTPN1-201ENST00000371621 EBAG9O00559 213 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 ZSCAN12O43309 604 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 PTPRGP23470 1445 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 KANK1Q14678 1352 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 FRMD3A2A2Y4 597 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 ZNF75DP51815 510 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 GSDMDP57764 484 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 NAA25Q14CX7 972 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
PTPN1-201ENST00000371621 KARSQ15046 597 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
PTPN1-201ENST00000371621 BRD1O95696 1058 aa13.71□□□□□ -0.21
PTPN1-201ENST00000371621 LRCH2Q5VUJ6 765 aa13.71□□□□□ -0.21
PTPN1-201ENST00000371621 RASSF8Q8NHQ8 419 aa13.71□□□□□ -0.21
PTPN1-201ENST00000371621 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
PTPN1-201ENST00000371621 PBRM1Q86U86 1689 aa13.71□□□□□ -0.22
PTPN1-201ENST00000371621 F6X3S4 739 aa13.71□□□□□ -0.22
PTPN1-201ENST00000371621 PDE6BP35913 854 aa13.71□□□□□ -0.22
PTPN1-201ENST00000371621 ARID5BQ14865 1188 aa13.71□□□□□ -0.22
PTPN1-201ENST00000371621 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 CLCN6P51797 869 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 BLOC1S2Q6QNY1 142 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
PTPN1-201ENST00000371621 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
PTPN1-201ENST00000371621 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 A0A087WWV3 80 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 ZEB2O60315 1214 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 PEX19P40855 299 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
PTPN1-201ENST00000371621 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 MORC2Q9Y6X9 1032 aaPredicted RBP13.69□□□□□ -0.22
PTPN1-201ENST00000371621 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 FKBP15Q5T1M5 1219 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 FSIP1Q8NA03 581 aa13.69□□□□□ -0.22
PTPN1-201ENST00000371621 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
PTPN1-201ENST00000371621 ERLIN2O94905 339 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
PTPN1-201ENST00000371621 PSMA5P28066 241 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 PPFIBP1Q86W92 1011 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 GNAI2P04899 355 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
PTPN1-201ENST00000371621 LZTFL1Q9NQ48 299 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms