RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 DLEC1Q9Y238 1755 aa20.25■□□□□ 0.83
SS18L1-202ENST00000370848 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
SS18L1-202ENST00000370848 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
SS18L1-202ENST00000370848 POLRMTO00411 1230 aaKnown RBP20.24■□□□□ 0.83
SS18L1-202ENST00000370848 DPEP1P16444 411 aa20.24■□□□□ 0.83
SS18L1-202ENST00000370848 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
SS18L1-202ENST00000370848 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
SS18L1-202ENST00000370848 AFDNP55196 1824 aaKnown RBP20.24■□□□□ 0.83
SS18L1-202ENST00000370848 COL15A1P39059 1388 aa20.23■□□□□ 0.83
SS18L1-202ENST00000370848 CEMIPQ8WUJ3 1361 aa20.23■□□□□ 0.83
SS18L1-202ENST00000370848 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
SS18L1-202ENST00000370848 NARFQ9UHQ1 456 aa20.22■□□□□ 0.83
SS18L1-202ENST00000370848 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
SS18L1-202ENST00000370848 KIF3CO14782 793 aa20.21■□□□□ 0.83
SS18L1-202ENST00000370848 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
SS18L1-202ENST00000370848 WWC3Q9ULE0 1092 aa20.21■□□□□ 0.83
SS18L1-202ENST00000370848 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
SS18L1-202ENST00000370848 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
SS18L1-202ENST00000370848 ZBTB1Q9Y2K1 713 aa20.2■□□□□ 0.82
SS18L1-202ENST00000370848 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
SS18L1-202ENST00000370848 USPL1Q5W0Q7 1092 aa20.18■□□□□ 0.82
SS18L1-202ENST00000370848 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
SS18L1-202ENST00000370848 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
SS18L1-202ENST00000370848 HEG1Q9ULI3 1381 aa20.18■□□□□ 0.82
SS18L1-202ENST00000370848 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
SS18L1-202ENST00000370848 ZPR1O75312 459 aa20.17■□□□□ 0.82
SS18L1-202ENST00000370848 FCHSD2O94868 740 aa20.17■□□□□ 0.82
SS18L1-202ENST00000370848 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
SS18L1-202ENST00000370848 SBF1O95248 1867 aa20.17■□□□□ 0.82
SS18L1-202ENST00000370848 HSPA6P17066 643 aa20.16■□□□□ 0.82
SS18L1-202ENST00000370848 NFIXQ14938 502 aa20.16■□□□□ 0.82
SS18L1-202ENST00000370848 ZNF790Q6PG37 636 aa20.16■□□□□ 0.82
SS18L1-202ENST00000370848 DALRD3Q5D0E6 543 aaKnown RBP20.15■□□□□ 0.82
SS18L1-202ENST00000370848 BCORQ6W2J9 1755 aa20.14■□□□□ 0.81
SS18L1-202ENST00000370848 ZNF496Q96IT1 587 aaPredicted RBP20.14■□□□□ 0.81
SS18L1-202ENST00000370848 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
SS18L1-202ENST00000370848 STARD3NLO95772 234 aa20.13■□□□□ 0.81
SS18L1-202ENST00000370848 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
SS18L1-202ENST00000370848 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
SS18L1-202ENST00000370848 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
SS18L1-202ENST00000370848 ANKRD31Q8N7Z5 1873 aa20.12■□□□□ 0.81
SS18L1-202ENST00000370848 TEFQ10587 303 aa20.12■□□□□ 0.81
SS18L1-202ENST00000370848 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
SS18L1-202ENST00000370848 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
SS18L1-202ENST00000370848 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
SS18L1-202ENST00000370848 A0A087WZG4 1122 aa20.11■□□□□ 0.81
SS18L1-202ENST00000370848 CHRNA5P30532 468 aa20.11■□□□□ 0.81
SS18L1-202ENST00000370848 IL6STP40189 918 aaPredicted RBP20.11■□□□□ 0.81
SS18L1-202ENST00000370848 TOMM70O94826 608 aa20.1■□□□□ 0.81
SS18L1-202ENST00000370848 SERPINB2P05120 415 aa20.1■□□□□ 0.81
SS18L1-202ENST00000370848 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
SS18L1-202ENST00000370848 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
SS18L1-202ENST00000370848 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.81
SS18L1-202ENST00000370848 COL11A2P13942 1736 aaPredicted RBP20.08■□□□□ 0.81
SS18L1-202ENST00000370848 FMNL2Q96PY5 1086 aa20.08■□□□□ 0.81
SS18L1-202ENST00000370848 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
SS18L1-202ENST00000370848 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
SS18L1-202ENST00000370848 MCM10Q7L590 875 aa20.07■□□□□ 0.8
SS18L1-202ENST00000370848 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
SS18L1-202ENST00000370848 RGL2O15211 777 aa20.06■□□□□ 0.8
SS18L1-202ENST00000370848 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
SS18L1-202ENST00000370848 PDZRN3Q9UPQ7 1066 aa20.06■□□□□ 0.8
SS18L1-202ENST00000370848 ANP32CO43423 234 aa20.05■□□□□ 0.8
SS18L1-202ENST00000370848 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
SS18L1-202ENST00000370848 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.8
SS18L1-202ENST00000370848 NMRK2Q9NPI5 230 aa20.05■□□□□ 0.8
SS18L1-202ENST00000370848 TIAM2Q8IVF5 1701 aa20.05■□□□□ 0.8
SS18L1-202ENST00000370848 LAMB4A4D0S4 1761 aa20.04■□□□□ 0.8
SS18L1-202ENST00000370848 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
SS18L1-202ENST00000370848 RBM46Q8TBY0 533 aaKnown RBP20.04■□□□□ 0.8
SS18L1-202ENST00000370848 ADAMTS8Q9UP79 889 aa20.04■□□□□ 0.8
SS18L1-202ENST00000370848 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 BTBD11A6QL63 1104 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 TTLL6Q8N841 843 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 BRIP1Q9BX63 1249 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
SS18L1-202ENST00000370848 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
SS18L1-202ENST00000370848 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
SS18L1-202ENST00000370848 NEFMP07197 916 aa20.02■□□□□ 0.8
SS18L1-202ENST00000370848 APLP1P51693 650 aa20.02■□□□□ 0.8
SS18L1-202ENST00000370848 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
SS18L1-202ENST00000370848 KDM3BQ7LBC6 1761 aa20.01■□□□□ 0.79
SS18L1-202ENST00000370848 KCNQ3O43525 872 aa20.01■□□□□ 0.79
SS18L1-202ENST00000370848 PRELPP51888 382 aa20.01■□□□□ 0.79
SS18L1-202ENST00000370848 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
SS18L1-202ENST00000370848 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
SS18L1-202ENST00000370848 DICER1Q9UPY3 1922 aaKnown RBP20.01■□□□□ 0.79
SS18L1-202ENST00000370848 H0YIN7 160 aa20■□□□□ 0.79
SS18L1-202ENST00000370848 A1BGP04217 495 aa20■□□□□ 0.79
SS18L1-202ENST00000370848 LMNB1P20700 586 aa20■□□□□ 0.79
SS18L1-202ENST00000370848 PNNQ9H307 717 aaKnown RBP20■□□□□ 0.79
SS18L1-202ENST00000370848 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
SS18L1-202ENST00000370848 DLG5Q8TDM6 1919 aa20■□□□□ 0.79
SS18L1-202ENST00000370848 NFKBIEO00221 500 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 PDE6BP35913 854 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 FSTL1Q12841 308 aa19.99■□□□□ 0.79
SS18L1-202ENST00000370848 CLEC4GQ6UXB4 293 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms