RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
RPF1-201ENST00000370654 KCNQ3O43525 872 aa17.74■□□□□ 0.43
RPF1-201ENST00000370654 NFIXQ14938 502 aa17.74■□□□□ 0.43
RPF1-201ENST00000370654 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
RPF1-201ENST00000370654 COL15A1P39059 1388 aa17.74■□□□□ 0.43
RPF1-201ENST00000370654 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
RPF1-201ENST00000370654 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
RPF1-201ENST00000370654 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
RPF1-201ENST00000370654 SIPA1L3O60292 1781 aaPredicted RBP17.72■□□□□ 0.43
RPF1-201ENST00000370654 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
RPF1-201ENST00000370654 KIF3CO14782 793 aa17.72■□□□□ 0.43
RPF1-201ENST00000370654 ZPR1O75312 459 aa17.72■□□□□ 0.43
RPF1-201ENST00000370654 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
RPF1-201ENST00000370654 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
RPF1-201ENST00000370654 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.43
RPF1-201ENST00000370654 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
RPF1-201ENST00000370654 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
RPF1-201ENST00000370654 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
RPF1-201ENST00000370654 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
RPF1-201ENST00000370654 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
RPF1-201ENST00000370654 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
RPF1-201ENST00000370654 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
RPF1-201ENST00000370654 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
RPF1-201ENST00000370654 ARFGEF1Q9Y6D6 1849 aa17.69■□□□□ 0.42
RPF1-201ENST00000370654 TEFQ10587 303 aa17.68■□□□□ 0.42
RPF1-201ENST00000370654 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
RPF1-201ENST00000370654 NRXN2Q9P2S2 1712 aa17.68■□□□□ 0.42
RPF1-201ENST00000370654 A1BGP04217 495 aa17.67■□□□□ 0.42
RPF1-201ENST00000370654 SERPINB2P05120 415 aa17.67■□□□□ 0.42
RPF1-201ENST00000370654 DALRD3Q5D0E6 543 aaKnown RBP17.67■□□□□ 0.42
RPF1-201ENST00000370654 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
RPF1-201ENST00000370654 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
RPF1-201ENST00000370654 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 STARD3NLO95772 234 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
RPF1-201ENST00000370654 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
RPF1-201ENST00000370654 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
RPF1-201ENST00000370654 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 MCM10Q7L590 875 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 CFAP53Q96M91 514 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
RPF1-201ENST00000370654 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
RPF1-201ENST00000370654 PRELPP51888 382 aa17.65■□□□□ 0.42
RPF1-201ENST00000370654 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
RPF1-201ENST00000370654 USP16Q9Y5T5 823 aa17.65■□□□□ 0.42
RPF1-201ENST00000370654 CEP350Q5VT06 3117 aa17.64■□□□□ 0.41
RPF1-201ENST00000370654 HSPA6P17066 643 aa17.63■□□□□ 0.41
RPF1-201ENST00000370654 RASSF7Q02833 373 aa17.63■□□□□ 0.41
RPF1-201ENST00000370654 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
RPF1-201ENST00000370654 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
RPF1-201ENST00000370654 SBF1O95248 1867 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 CAMTA2O94983 1202 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 IL6STP40189 918 aaPredicted RBP17.61■□□□□ 0.41
RPF1-201ENST00000370654 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 RNF181Q9P0P0 153 aa17.61■□□□□ 0.41
RPF1-201ENST00000370654 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
RPF1-201ENST00000370654 A0A087WZG4 1122 aa17.6■□□□□ 0.41
RPF1-201ENST00000370654 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
RPF1-201ENST00000370654 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
RPF1-201ENST00000370654 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
RPF1-201ENST00000370654 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
RPF1-201ENST00000370654 COL11A2P13942 1736 aaPredicted RBP17.57■□□□□ 0.4
RPF1-201ENST00000370654 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
RPF1-201ENST00000370654 TOMM70O94826 608 aa17.56■□□□□ 0.4
RPF1-201ENST00000370654 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
RPF1-201ENST00000370654 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
RPF1-201ENST00000370654 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
RPF1-201ENST00000370654 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
RPF1-201ENST00000370654 H0YIN7 160 aa17.55■□□□□ 0.4
RPF1-201ENST00000370654 NFKBIEO00221 500 aa17.55■□□□□ 0.4
RPF1-201ENST00000370654 RRAGCQ9HB90 399 aa17.55■□□□□ 0.4
RPF1-201ENST00000370654 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
RPF1-201ENST00000370654 BCORQ6W2J9 1755 aa17.55■□□□□ 0.4
RPF1-201ENST00000370654 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
RPF1-201ENST00000370654 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
RPF1-201ENST00000370654 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPF1-201ENST00000370654 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
RPF1-201ENST00000370654 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
RPF1-201ENST00000370654 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
RPF1-201ENST00000370654 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
RPF1-201ENST00000370654 C21orf2O43822 256 aa17.53■□□□□ 0.4
RPF1-201ENST00000370654 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
RPF1-201ENST00000370654 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.39
RPF1-201ENST00000370654 HTRA3P83110 453 aa17.52■□□□□ 0.39
RPF1-201ENST00000370654 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.39
RPF1-201ENST00000370654 LMNB1P20700 586 aa17.51■□□□□ 0.39
RPF1-201ENST00000370654 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
RPF1-201ENST00000370654 PDE6BP35913 854 aa17.5■□□□□ 0.39
RPF1-201ENST00000370654 HLFQ16534 295 aa17.5■□□□□ 0.39
RPF1-201ENST00000370654 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
RPF1-201ENST00000370654 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
RPF1-201ENST00000370654 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
RPF1-201ENST00000370654 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
RPF1-201ENST00000370654 SRGNP10124 158 aa17.49■□□□□ 0.39
RPF1-201ENST00000370654 APLP1P51693 650 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms