RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZNF830Q96NB3 372 aaPredicted RBP19.97■□□□□ 0.79
PTP4A1-201ENST00000370651 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
PTP4A1-201ENST00000370651 NME9Q86XW9 330 aa19.97■□□□□ 0.79
PTP4A1-201ENST00000370651 MAP9Q49MG5 647 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 CCDC8Q9H0W5 538 aaPredicted RBP19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 ZSCAN22P10073 491 aaPredicted RBP19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 FLIIQ13045 1269 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 SNW1Q13573 536 aaKnown RBP19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 RAB3GAP1Q15042 981 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 CEP135Q66GS9 1140 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 SMC5Q8IY18 1101 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 TMC6Q7Z403 805 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 MBIPQ9NS73 344 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 ECHDC1Q9NTX5 307 aa19.96■□□□□ 0.79
PTP4A1-201ENST00000370651 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 GTF2F1P35269 517 aaKnown RBP eCLIP19.95■□□□□ 0.783e-7■■□□□ 13.2
PTP4A1-201ENST00000370651 BMS1Q14692 1282 aaKnown RBP19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 DNAAF4Q8WXU2 420 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 TSHZ3Q63HK5 1081 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 EVI5LQ96CN4 794 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 ZHX3Q9H4I2 956 aa19.95■□□□□ 0.78
PTP4A1-201ENST00000370651 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 SOGA3Q5TF21 947 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 LARP1Q6PKG0 1096 aaKnown RBP19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 TRERF1Q96PN7 1200 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 SHTN1A0MZ66 631 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 MPHOSPH8Q99549 860 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 WAPLQ7Z5K2 1190 aa19.94■□□□□ 0.78
PTP4A1-201ENST00000370651 AIDAQ96BJ3 306 aa19.93■□□□□ 0.78
PTP4A1-201ENST00000370651 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
PTP4A1-201ENST00000370651 MCM3P25205 808 aa19.93■□□□□ 0.78
PTP4A1-201ENST00000370651 TAF4BQ92750 862 aa19.93■□□□□ 0.78
PTP4A1-201ENST00000370651 SEC24BO95487 1268 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 PLCD4Q9BRC7 762 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 ZNF397Q8NF99 534 aaPredicted RBP19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 CCDC171Q6TFL3 1326 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 BIN1O00499 593 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 TAX1BP1Q86VP1 789 aa19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 BMP2KQ9NSY1 1161 aaPredicted RBP19.92■□□□□ 0.78
PTP4A1-201ENST00000370651 CNNM3Q8NE01 707 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 ANAPC15P60006 121 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 KRT222Q8N1A0 295 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 FAM200AQ8TCP9 573 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 CNPY2Q9Y2B0 182 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 IFIT1P09914 478 aaKnown RBP19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 NEFHP12036 1026 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 CCT2P78371 535 aaKnown RBP19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 SPA17Q15506 151 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 SLC26A8Q96RN1 970 aa19.91■□□□□ 0.78
PTP4A1-201ENST00000370651 CUL7Q14999 1698 aa19.9■□□□□ 0.78
PTP4A1-201ENST00000370651 GOLGA6L9A6NEM1 432 aa19.9■□□□□ 0.78
PTP4A1-201ENST00000370651 TTC12Q9H892 705 aaPredicted RBP19.9■□□□□ 0.78
PTP4A1-201ENST00000370651 CCDC186Q7Z3E2 898 aa19.9■□□□□ 0.78
PTP4A1-201ENST00000370651 CCDC150Q8NCX0 1101 aa19.9■□□□□ 0.78
PTP4A1-201ENST00000370651 RAPGEF3O95398 923 aa19.89■□□□□ 0.78
PTP4A1-201ENST00000370651 SSBP05455 408 aaKnown RBP eCLIP19.89■□□□□ 0.78
PTP4A1-201ENST00000370651 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 POTEB2H3BUK9 544 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 PDE1AP54750 535 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 RLBP1P12271 317 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 ANKRD44Q8N8A2 993 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 CPLX3Q8WVH0 158 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 AKAP2Q9Y2D5 859 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 PLB1Q6P1J6 1458 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 CCDC85AQ96PX6 553 aaPredicted RBP19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 ESYT1Q9BSJ8 1104 aa19.89■□□□□ 0.77
PTP4A1-201ENST00000370651 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 TNNQ9UQP3 1299 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 CCDC196A0A1B0GTZ2 297 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 GOLGA8BA8MQT2 603 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 TMX1Q9H3N1 280 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 LRP2BPQ9P2M1 347 aa19.88■□□□□ 0.77
PTP4A1-201ENST00000370651 FAM83GA6ND36 823 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 MEIS3Q99687 375 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 ZSCAN16Q9H4T2 348 aaPredicted RBP19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 ENOX2Q16206 610 aaKnown RBP19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 ANO6Q4KMQ2 910 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 MYD88Q99836 296 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 RAI14Q9P0K7 980 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 HMG20BQ9P0W2 317 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 ANKRD36BQ8N2N9 1353 aa19.87■□□□□ 0.77
PTP4A1-201ENST00000370651 SKILP12757 684 aa19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 PIBF1Q8WXW3 757 aa19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 DBF4Q9UBU7 674 aaPredicted RBP19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 THEMISQ8N1K5 641 aaPredicted RBP19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 METTL24Q5JXM2 366 aa19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 NEK1Q96PY6 1258 aa19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 RRAGDQ9NQL2 400 aaPredicted RBP19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 SEPT7Q16181 437 aaKnown RBP19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 SMARCC1Q92922 1105 aaPredicted RBP19.86■□□□□ 0.77
PTP4A1-201ENST00000370651 GNG11P61952 73 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 NECAB1Q8N987 351 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 NUP88Q99567 741 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms