RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 CYP27B1O15528 508 aa12.76□□□□□ -0.37
GTF2B-201ENST00000370500 MTHFSP49914 203 aa12.76□□□□□ -0.37
GTF2B-201ENST00000370500 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
GTF2B-201ENST00000370500 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
GTF2B-201ENST00000370500 IL13P35225 146 aa12.75□□□□□ -0.37
GTF2B-201ENST00000370500 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
GTF2B-201ENST00000370500 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
GTF2B-201ENST00000370500 KIF3CO14782 793 aa12.74□□□□□ -0.37
GTF2B-201ENST00000370500 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
GTF2B-201ENST00000370500 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
GTF2B-201ENST00000370500 NUP188Q5SRE5 1749 aa12.73□□□□□ -0.37
GTF2B-201ENST00000370500 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
GTF2B-201ENST00000370500 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF2B-201ENST00000370500 KDRP35968 1356 aa12.73□□□□□ -0.37
GTF2B-201ENST00000370500 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
GTF2B-201ENST00000370500 PHKG2P15735 406 aa12.72□□□□□ -0.37
GTF2B-201ENST00000370500 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
GTF2B-201ENST00000370500 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
GTF2B-201ENST00000370500 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
GTF2B-201ENST00000370500 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
GTF2B-201ENST00000370500 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.37
GTF2B-201ENST00000370500 SULT6B1Q6IMI4 303 aa12.71□□□□□ -0.37
GTF2B-201ENST00000370500 BTAF1O14981 1849 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 MPRIPQ6WCQ1 1025 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
GTF2B-201ENST00000370500 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 SPON1Q9HCB6 807 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
GTF2B-201ENST00000370500 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 LRP5O75197 1615 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 RGL2O15211 777 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 SLC34A2O95436 690 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 TMOD3Q9NYL9 352 aa12.69□□□□□ -0.38
GTF2B-201ENST00000370500 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
GTF2B-201ENST00000370500 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
GTF2B-201ENST00000370500 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
GTF2B-201ENST00000370500 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
GTF2B-201ENST00000370500 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
GTF2B-201ENST00000370500 PIGBQ92521 554 aa12.68□□□□□ -0.38
GTF2B-201ENST00000370500 NUDT7P0C024 238 aa12.67□□□□□ -0.38
GTF2B-201ENST00000370500 PBX2P40425 430 aa12.67□□□□□ -0.38
GTF2B-201ENST00000370500 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
GTF2B-201ENST00000370500 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
GTF2B-201ENST00000370500 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
GTF2B-201ENST00000370500 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
GTF2B-201ENST00000370500 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
GTF2B-201ENST00000370500 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
GTF2B-201ENST00000370500 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
GTF2B-201ENST00000370500 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
GTF2B-201ENST00000370500 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
GTF2B-201ENST00000370500 HMOX1P09601 288 aa12.64□□□□□ -0.39
GTF2B-201ENST00000370500 CABP4P57796 275 aa12.64□□□□□ -0.39
GTF2B-201ENST00000370500 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
GTF2B-201ENST00000370500 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
GTF2B-201ENST00000370500 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
GTF2B-201ENST00000370500 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
GTF2B-201ENST00000370500 LY75O60449 1722 aa12.63□□□□□ -0.39
GTF2B-201ENST00000370500 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
GTF2B-201ENST00000370500 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
GTF2B-201ENST00000370500 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
GTF2B-201ENST00000370500 SIK1P57059 783 aa12.62□□□□□ -0.39
GTF2B-201ENST00000370500 RALBP1Q15311 655 aa12.62□□□□□ -0.39
GTF2B-201ENST00000370500 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
GTF2B-201ENST00000370500 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
GTF2B-201ENST00000370500 FCHSD2O94868 740 aa12.61□□□□□ -0.39
GTF2B-201ENST00000370500 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
GTF2B-201ENST00000370500 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
GTF2B-201ENST00000370500 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
GTF2B-201ENST00000370500 TOGARAM1Q9Y4F4 1720 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
GTF2B-201ENST00000370500 CASZ1Q86V15 1759 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 KCNQ4P56696 695 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
GTF2B-201ENST00000370500 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 PDGFDQ9GZP0 370 aaPredicted RBP12.6□□□□□ -0.39
GTF2B-201ENST00000370500 ITGB4P16144 1822 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
GTF2B-201ENST00000370500 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
GTF2B-201ENST00000370500 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
GTF2B-201ENST00000370500 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
GTF2B-201ENST00000370500 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
GTF2B-201ENST00000370500 AK7Q96M32 723 aa12.58□□□□□ -0.4
GTF2B-201ENST00000370500 SLC52A2Q9HAB3 445 aa12.58□□□□□ -0.4
GTF2B-201ENST00000370500 QSER1Q2KHR3 1735 aa12.58□□□□□ -0.4
GTF2B-201ENST00000370500 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
GTF2B-201ENST00000370500 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
GTF2B-201ENST00000370500 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
GTF2B-201ENST00000370500 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
GTF2B-201ENST00000370500 NEFMP07197 916 aa12.56□□□□□ -0.4
GTF2B-201ENST00000370500 SSFA2P28290 1259 aa12.56□□□□□ -0.4
GTF2B-201ENST00000370500 POLD1P28340 1107 aa12.56□□□□□ -0.4
GTF2B-201ENST00000370500 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
GTF2B-201ENST00000370500 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
GTF2B-201ENST00000370500 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms