RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
VMA21-202ENST00000370361 GPBP1L1Q9HC44 474 aaPredicted RBP21.57■■□□□ 1.04
VMA21-202ENST00000370361 BRCA1P38398 1863 aaKnown RBP21.57■■□□□ 1.04
VMA21-202ENST00000370361 TM4SF1P30408 202 aa21.56■■□□□ 1.04
VMA21-202ENST00000370361 BCS1LQ9Y276 419 aa21.56■■□□□ 1.04
VMA21-202ENST00000370361 HEG1Q9ULI3 1381 aa21.56■■□□□ 1.04
VMA21-202ENST00000370361 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 DPEP1P16444 411 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 USPL1Q5W0Q7 1092 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 PIM2Q9P1W9 311 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 ZBTB1Q9Y2K1 713 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
VMA21-202ENST00000370361 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
VMA21-202ENST00000370361 HTATSF1O43719 755 aaKnown RBP21.54■■□□□ 1.04
VMA21-202ENST00000370361 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
VMA21-202ENST00000370361 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
VMA21-202ENST00000370361 DDR1Q08345 913 aa21.54■■□□□ 1.04
VMA21-202ENST00000370361 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
VMA21-202ENST00000370361 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
VMA21-202ENST00000370361 NEFMP07197 916 aa21.52■■□□□ 1.04
VMA21-202ENST00000370361 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
VMA21-202ENST00000370361 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
VMA21-202ENST00000370361 NRXN2Q9P2S2 1712 aa21.52■■□□□ 1.03
VMA21-202ENST00000370361 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
VMA21-202ENST00000370361 DALRD3Q5D0E6 543 aaKnown RBP21.51■■□□□ 1.03
VMA21-202ENST00000370361 PHACTR3Q96KR7 559 aa21.51■■□□□ 1.03
VMA21-202ENST00000370361 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
VMA21-202ENST00000370361 KCNA3P22001 575 aa21.5■■□□□ 1.03
VMA21-202ENST00000370361 IL6STP40189 918 aaPredicted RBP21.5■■□□□ 1.03
VMA21-202ENST00000370361 WWC3Q9ULE0 1092 aa21.5■■□□□ 1.03
VMA21-202ENST00000370361 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
VMA21-202ENST00000370361 NFIXQ14938 502 aa21.49■■□□□ 1.03
VMA21-202ENST00000370361 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
VMA21-202ENST00000370361 ARHGAP27Q6ZUM4 889 aa21.48■■□□□ 1.03
VMA21-202ENST00000370361 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
VMA21-202ENST00000370361 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
VMA21-202ENST00000370361 AFDNP55196 1824 aaKnown RBP21.46■■□□□ 1.03
VMA21-202ENST00000370361 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
VMA21-202ENST00000370361 RGL2O15211 777 aa21.45■■□□□ 1.02
VMA21-202ENST00000370361 SERPINB2P05120 415 aa21.45■■□□□ 1.02
VMA21-202ENST00000370361 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
VMA21-202ENST00000370361 CARMIL3Q8ND23 1372 aa21.44■■□□□ 1.02
VMA21-202ENST00000370361 DLEC1Q9Y238 1755 aa21.43■■□□□ 1.02
VMA21-202ENST00000370361 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
VMA21-202ENST00000370361 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
VMA21-202ENST00000370361 CHRNA5P30532 468 aa21.41■■□□□ 1.02
VMA21-202ENST00000370361 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
VMA21-202ENST00000370361 H0YIN7 160 aa21.4■■□□□ 1.02
VMA21-202ENST00000370361 RALBP1Q15311 655 aa21.4■■□□□ 1.02
VMA21-202ENST00000370361 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
VMA21-202ENST00000370361 CLEC4GQ6UXB4 293 aa21.4■■□□□ 1.02
VMA21-202ENST00000370361 MCM10Q7L590 875 aa21.4■■□□□ 1.02
VMA21-202ENST00000370361 BCORQ6W2J9 1755 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 A1BGP04217 495 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 PDE6BP35913 854 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 BRIP1Q9BX63 1249 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
VMA21-202ENST00000370361 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
VMA21-202ENST00000370361 C9orf131Q5VYM1 1079 aa21.38■■□□□ 1.01
VMA21-202ENST00000370361 TBC1D9BQ66K14 1250 aa21.38■■□□□ 1.01
VMA21-202ENST00000370361 TBC1D2BQ9UPU7 963 aa21.38■■□□□ 1.01
VMA21-202ENST00000370361 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
VMA21-202ENST00000370361 KIF3CO14782 793 aa21.37■■□□□ 1.01
VMA21-202ENST00000370361 KCNQ3O43525 872 aa21.37■■□□□ 1.01
VMA21-202ENST00000370361 CAMTA2O94983 1202 aa21.37■■□□□ 1.01
VMA21-202ENST00000370361 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
VMA21-202ENST00000370361 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
VMA21-202ENST00000370361 MAPK8IP3Q9UPT6 1336 aa21.36■■□□□ 1.01
VMA21-202ENST00000370361 BICDL1Q6ZP65 573 aa21.36■■□□□ 1.01
VMA21-202ENST00000370361 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
VMA21-202ENST00000370361 TOMM70O94826 608 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 HSPA6P17066 643 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 ST5P78524 1137 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 CNBD1Q8NA66 436 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 RNF181Q9P0P0 153 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 LAMB4A4D0S4 1761 aa21.35■■□□□ 1.01
VMA21-202ENST00000370361 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
VMA21-202ENST00000370361 NPHP1O15259 732 aa21.34■■□□□ 1.01
VMA21-202ENST00000370361 SBF1O95248 1867 aa21.34■■□□□ 1.01
VMA21-202ENST00000370361 DCTN1Q14203 1278 aa21.33■■□□□ 1.01
VMA21-202ENST00000370361 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
VMA21-202ENST00000370361 LMNB1P20700 586 aa21.32■■□□□ 1
VMA21-202ENST00000370361 KDM3BQ7LBC6 1761 aa21.32■■□□□ 1
VMA21-202ENST00000370361 ANKRD31Q8N7Z5 1873 aa21.32■■□□□ 1
VMA21-202ENST00000370361 SOGA3Q5TF21 947 aa21.31■■□□□ 1
VMA21-202ENST00000370361 CNKSR1Q969H4 720 aa21.31■■□□□ 1
VMA21-202ENST00000370361 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
VMA21-202ENST00000370361 STYK1Q6J9G0 422 aa21.3■■□□□ 1
VMA21-202ENST00000370361 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
VMA21-202ENST00000370361 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
VMA21-202ENST00000370361 RBM46Q8TBY0 533 aaKnown RBP21.29■■□□□ 1
VMA21-202ENST00000370361 BABAM1Q9NWV8 329 aa21.29■■□□□ 1
VMA21-202ENST00000370361 NBPF5PQ86XG9 351 aaPredicted RBP21.28■■□□□ 1
VMA21-202ENST00000370361 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 1
VMA21-202ENST00000370361 ERBB4Q15303 1308 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms