RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 AMPHP49418 695 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 ZNF165P49910 485 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 LIMCH1Q9UPQ0 1083 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 MSH6P52701 1360 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 ZMYM3Q14202 1370 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.433e-13■■■■■ 48.5
PRPF38B-201ENST00000370021 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 F13A1P00488 732 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 NCOA3Q9Y6Q9 1424 aa12.38□□□□□ -0.43
PRPF38B-201ENST00000370021 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 IDI1Q13907 227 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 UVSSAQ2YD98 709 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 SIL1Q9H173 461 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 MYOM2P54296 1465 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 ANKRD36BQ8N2N9 1353 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 GUCY1B3Q02153 619 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 KIDINS220Q9ULH0 1771 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 SMC2O95347 1197 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 SDF4Q9BRK5 362 aa12.37□□□□□ -0.43
PRPF38B-201ENST00000370021 RAPGEF3O95398 923 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 SF3A1Q15459 793 aaKnown RBP12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 TYRO3Q06418 890 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 CEP135Q66GS9 1140 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 ZNF518AQ6AHZ1 1483 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 PPLO60437 1756 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 GNAI3P08754 354 aa12.36□□□□□ -0.43
PRPF38B-201ENST00000370021 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 NRDCO43847 1150 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 KIF20AO95235 890 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 LIG1P18858 919 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 C9orf78Q9NZ63 289 aaPredicted RBP12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 CCDC66A2RUB6 948 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 TPM3P06753 285 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
PRPF38B-201ENST00000370021 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 HSP90AB2PQ58FF8 381 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 ABCC4O15439 1325 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 BIN1O00499 593 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 CREBRFQ8IUR6 639 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 SKILP12757 684 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
PRPF38B-201ENST00000370021 ELF2Q15723 593 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 LARGE1O95461 756 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 LMTK2Q8IWU2 1503 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
PRPF38B-201ENST00000370021 FLIIQ13045 1269 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 CBX8Q9HC52 389 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 ME1P48163 572 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 IL25Q9H293 177 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 SNX14Q9Y5W7 946 aa12.32□□□□□ -0.44
PRPF38B-201ENST00000370021 ADGRB3O60242 1522 aa12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 AP5Z1O43299 807 aa12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
PRPF38B-201ENST00000370021 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 PDILTQ8N807 584 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 KINO60870 393 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms