RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 BIRC2Q13490 618 aa12.6□□□□□ -0.39
HIPK1-203ENST00000369553 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
HIPK1-203ENST00000369553 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
HIPK1-203ENST00000369553 TRIM66O15016 1216 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 BRMS1Q9HCU9 246 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 CCDC39Q9UFE4 941 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
HIPK1-203ENST00000369553 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 CXorf56Q9H5V9 222 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 STRCQ7RTU9 1775 aa12.59□□□□□ -0.39
HIPK1-203ENST00000369553 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-203ENST00000369553 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
HIPK1-203ENST00000369553 C17orf53Q8N3J3 647 aaPredicted RBP12.59□□□□□ -0.39
HIPK1-203ENST00000369553 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 HMOX1P09601 288 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
HIPK1-203ENST00000369553 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 SKOR2Q2VWA4 1001 aaPredicted RBP12.58□□□□□ -0.4
HIPK1-203ENST00000369553 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
HIPK1-203ENST00000369553 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
HIPK1-203ENST00000369553 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
HIPK1-203ENST00000369553 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
HIPK1-203ENST00000369553 FCHSD2O94868 740 aa12.57□□□□□ -0.4
HIPK1-203ENST00000369553 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
HIPK1-203ENST00000369553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■□□ 14.6
HIPK1-203ENST00000369553 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
HIPK1-203ENST00000369553 CASQ1P31415 396 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 NLRP6P59044 892 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
HIPK1-203ENST00000369553 LRCH2Q5VUJ6 765 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 MAPK8IP3Q9UPT6 1336 aa12.56□□□□□ -0.4
HIPK1-203ENST00000369553 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
HIPK1-203ENST00000369553 PPP2R5AQ15172 486 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
HIPK1-203ENST00000369553 SSR1P43307 286 aaKnown RBP12.55□□□□□ -0.4
HIPK1-203ENST00000369553 E2F4Q16254 413 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
HIPK1-203ENST00000369553 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
HIPK1-203ENST00000369553 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
HIPK1-203ENST00000369553 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
HIPK1-203ENST00000369553 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
HIPK1-203ENST00000369553 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
HIPK1-203ENST00000369553 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
HIPK1-203ENST00000369553 C1orf167Q5SNV9 1468 aa12.54□□□□□ -0.4
HIPK1-203ENST00000369553 RGPD1P0DJD0 1748 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 PSME1Q06323 249 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 GBP4Q96PP9 640 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
HIPK1-203ENST00000369553 KIF1CO43896 1103 aaKnown RBP12.53□□□□□ -0.4
HIPK1-203ENST00000369553 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 MED4Q9NPJ6 270 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 LCMT1Q9UIC8 334 aa12.53□□□□□ -0.4
HIPK1-203ENST00000369553 FOXO3O43524 673 aa12.52□□□□□ -0.4
HIPK1-203ENST00000369553 MYO1CO00159 1063 aa12.52□□□□□ -0.41
HIPK1-203ENST00000369553 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
HIPK1-203ENST00000369553 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
HIPK1-203ENST00000369553 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.41
HIPK1-203ENST00000369553 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
HIPK1-203ENST00000369553 CYP2C19P33261 490 aa12.52□□□□□ -0.41
HIPK1-203ENST00000369553 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
HIPK1-203ENST00000369553 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
HIPK1-203ENST00000369553 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
HIPK1-203ENST00000369553 MST1RQ04912 1400 aa12.51□□□□□ -0.41
HIPK1-203ENST00000369553 RBM5P52756 815 aaKnown RBP eCLIP12.51□□□□□ -0.41
HIPK1-203ENST00000369553 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
HIPK1-203ENST00000369553 FLT4P35916 1363 aa12.51□□□□□ -0.41
HIPK1-203ENST00000369553 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
HIPK1-203ENST00000369553 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 LTN1O94822 1766 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 GOLGA6L6A8MZA4 724 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 BCAR3O75815 825 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 AMPHP49418 695 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
HIPK1-203ENST00000369553 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
HIPK1-203ENST00000369553 NFAT5O94916 1531 aa12.49□□□□□ -0.41
HIPK1-203ENST00000369553 NCOA3Q9Y6Q9 1424 aa12.49□□□□□ -0.41
HIPK1-203ENST00000369553 PPP1R12AO14974 1030 aaPredicted RBP12.49□□□□□ -0.41
HIPK1-203ENST00000369553 ATF3P18847 181 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms