RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 A0A0G2JS52 829 aa24.59■■□□□ 1.53
CHTOP-204ENST00000368694 INTS3Q68E01 1043 aaKnown RBP24.59■■□□□ 1.53
CHTOP-204ENST00000368694 ZBTB40Q9NUA8 1239 aa24.59■■□□□ 1.53
CHTOP-204ENST00000368694 PCDHB15Q9Y5E8 787 aa24.59■■□□□ 1.53
CHTOP-204ENST00000368694 KDM2BQ8NHM5 1336 aa24.59■■□□□ 1.53
CHTOP-204ENST00000368694 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
CHTOP-204ENST00000368694 KCPQ6ZWJ8 1503 aa24.58■■□□□ 1.53
CHTOP-204ENST00000368694 PIGBQ92521 554 aa24.58■■□□□ 1.53
CHTOP-204ENST00000368694 ZBTB7BO15156 539 aaPredicted RBP24.57■■□□□ 1.52
CHTOP-204ENST00000368694 PTCD1O75127 700 aaKnown RBP24.57■■□□□ 1.52
CHTOP-204ENST00000368694 MARCH10Q8NA82 808 aaPredicted RBP24.56■■□□□ 1.52
CHTOP-204ENST00000368694 PROSER3Q2NL68 480 aa24.55■■□□□ 1.52
CHTOP-204ENST00000368694 USP16Q9Y5T5 823 aa24.55■■□□□ 1.52
CHTOP-204ENST00000368694 BCL9O00512 1426 aa24.55■■□□□ 1.52
CHTOP-204ENST00000368694 CCT4P50991 539 aaKnown RBP24.55■■□□□ 1.52
CHTOP-204ENST00000368694 DDX21Q9NR30 783 aaKnown RBP eCLIP24.55■■□□□ 1.52
CHTOP-204ENST00000368694 HYPKQ9NX55 129 aa24.55■■□□□ 1.52
CHTOP-204ENST00000368694 N4BP2Q86UW6 1770 aaPredicted RBP24.54■■□□□ 1.52
CHTOP-204ENST00000368694 IGHDP01880 384 aa24.54■■□□□ 1.52
CHTOP-204ENST00000368694 ASAP1Q9ULH1 1129 aa24.54■■□□□ 1.52
CHTOP-204ENST00000368694 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
CHTOP-204ENST00000368694 PXDNLA1KZ92 1463 aa24.52■■□□□ 1.52
CHTOP-204ENST00000368694 MYL6BP14649 208 aa24.52■■□□□ 1.52
CHTOP-204ENST00000368694 RWDD1Q9H446 243 aaPredicted RBP24.52■■□□□ 1.52
CHTOP-204ENST00000368694 PDIA6Q15084 440 aa24.51■■□□□ 1.51
CHTOP-204ENST00000368694 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
CHTOP-204ENST00000368694 C1orf115Q9H7X2 142 aa24.51■■□□□ 1.51
CHTOP-204ENST00000368694 ATG3Q9NT62 314 aa24.51■■□□□ 1.51
CHTOP-204ENST00000368694 THSD7AQ9UPZ6 1657 aa24.51■■□□□ 1.51
CHTOP-204ENST00000368694 ACSBG1Q96GR2 724 aa24.5■■□□□ 1.51
CHTOP-204ENST00000368694 PI4KAP2A4QPH2 592 aa24.5■■□□□ 1.51
CHTOP-204ENST00000368694 PI4KAP1Q8N8J0 262 aa24.5■■□□□ 1.51
CHTOP-204ENST00000368694 TRPC5Q9UL62 973 aaPredicted RBP24.5■■□□□ 1.51
CHTOP-204ENST00000368694 AIMP1Q12904 312 aaKnown RBP24.49■■□□□ 1.51
CHTOP-204ENST00000368694 RBM42Q9BTD8 480 aaKnown RBP24.49■■□□□ 1.51
CHTOP-204ENST00000368694 ATRNO75882 1429 aa24.48■■□□□ 1.51
CHTOP-204ENST00000368694 PIP4K2AP48426 406 aaPredicted RBP24.48■■□□□ 1.51
CHTOP-204ENST00000368694 DNAAF4Q8WXU2 420 aa24.47■■□□□ 1.51
CHTOP-204ENST00000368694 MEIS3Q99687 375 aa24.47■■□□□ 1.51
CHTOP-204ENST00000368694 ADCY9O60503 1353 aa24.47■■□□□ 1.51
CHTOP-204ENST00000368694 DDX58O95786 925 aaKnown RBP24.47■■□□□ 1.51
CHTOP-204ENST00000368694 HDAC1Q13547 482 aaPredicted RBP24.45■■□□□ 1.5
CHTOP-204ENST00000368694 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
CHTOP-204ENST00000368694 ERBB4Q15303 1308 aa24.44■■□□□ 1.5
CHTOP-204ENST00000368694 KSR2Q6VAB6 950 aa24.44■■□□□ 1.5
CHTOP-204ENST00000368694 VSIG10Q8N0Z9 540 aa24.44■■□□□ 1.5
CHTOP-204ENST00000368694 SRCIN1Q9C0H9 1055 aa24.44■■□□□ 1.5
CHTOP-204ENST00000368694 XAGE3Q8WTP9 111 aa24.44■■□□□ 1.5
CHTOP-204ENST00000368694 COPS6Q7L5N1 327 aa24.43■■□□□ 1.5
CHTOP-204ENST00000368694 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
CHTOP-204ENST00000368694 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
CHTOP-204ENST00000368694 A1BGP04217 495 aa24.42■■□□□ 1.5
CHTOP-204ENST00000368694 SKAP1Q86WV1 359 aa24.42■■□□□ 1.5
CHTOP-204ENST00000368694 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
CHTOP-204ENST00000368694 RIC3Q7Z5B4 369 aa24.41■■□□□ 1.5
CHTOP-204ENST00000368694 DNAJC10Q8IXB1 793 aa24.41■■□□□ 1.5
CHTOP-204ENST00000368694 ATP10DQ9P241 1426 aa24.41■■□□□ 1.5
CHTOP-204ENST00000368694 BEND3Q5T5X7 828 aa24.41■■□□□ 1.5
CHTOP-204ENST00000368694 NBPF26B4DH59 902 aa24.4■■□□□ 1.5
CHTOP-204ENST00000368694 GNAI3P08754 354 aa24.4■■□□□ 1.5
CHTOP-204ENST00000368694 NBPF14Q5TI25 921 aa24.4■■□□□ 1.5
CHTOP-204ENST00000368694 NBPF10Q6P3W6 841 aaKnown RBP24.4■■□□□ 1.5
CHTOP-204ENST00000368694 NBPF15Q8N660 670 aa24.4■■□□□ 1.5
CHTOP-204ENST00000368694 STARD3NLO95772 234 aa24.39■■□□□ 1.5
CHTOP-204ENST00000368694 KCNQ2O43526 872 aa24.39■■□□□ 1.49
CHTOP-204ENST00000368694 ARFGEF2Q9Y6D5 1785 aa24.38■■□□□ 1.49
CHTOP-204ENST00000368694 TJP1Q07157 1748 aa24.38■■□□□ 1.49
CHTOP-204ENST00000368694 ANKRD13DQ6ZTN6 518 aa24.38■■□□□ 1.49
CHTOP-204ENST00000368694 GNAI2P04899 355 aa24.37■■□□□ 1.49
CHTOP-204ENST00000368694 SEPT12Q8IYM1 358 aa24.37■■□□□ 1.49
CHTOP-204ENST00000368694 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
CHTOP-204ENST00000368694 UBTFL1P0CB47 393 aaPredicted RBP24.36■■□□□ 1.49
CHTOP-204ENST00000368694 FAM182BQ5T319 152 aa24.36■■□□□ 1.49
CHTOP-204ENST00000368694 SIRT2Q8IXJ6 389 aa24.36■■□□□ 1.49
CHTOP-204ENST00000368694 USP44Q9H0E7 712 aa24.36■■□□□ 1.49
CHTOP-204ENST00000368694 ONECUT3O60422 494 aaPredicted RBP24.36■■□□□ 1.49
CHTOP-204ENST00000368694 NEXNQ0ZGT2 675 aa24.36■■□□□ 1.49
CHTOP-204ENST00000368694 CEP85Q6P2H3 762 aa24.35■■□□□ 1.49
CHTOP-204ENST00000368694 ZNF330Q9Y3S2 320 aaPredicted RBP24.35■■□□□ 1.49
CHTOP-204ENST00000368694 PALLDQ8WX93 1383 aa24.35■■□□□ 1.49
CHTOP-204ENST00000368694 CWF19L2Q2TBE0 894 aaKnown RBP24.34■■□□□ 1.49
CHTOP-204ENST00000368694 RPAP2Q8IXW5 612 aaPredicted RBP24.34■■□□□ 1.49
CHTOP-204ENST00000368694 ANKRD44Q8N8A2 993 aa24.34■■□□□ 1.49
CHTOP-204ENST00000368694 ALDH1L1O75891 902 aa24.34■■□□□ 1.49
CHTOP-204ENST00000368694 RGS3P49796 1198 aa24.34■■□□□ 1.49
CHTOP-204ENST00000368694 LINS1Q8NG48 757 aa24.34■■□□□ 1.49
CHTOP-204ENST00000368694 AFDNP55196 1824 aaKnown RBP24.34■■□□□ 1.49
CHTOP-204ENST00000368694 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
CHTOP-204ENST00000368694 SMARCC1Q92922 1105 aaPredicted RBP24.33■■□□□ 1.49
CHTOP-204ENST00000368694 RBM19Q9Y4C8 960 aaKnown RBP24.33■■□□□ 1.49
CHTOP-204ENST00000368694 SMC5Q8IY18 1101 aa24.33■■□□□ 1.48
CHTOP-204ENST00000368694 PDZRN3Q9UPQ7 1066 aa24.33■■□□□ 1.48
CHTOP-204ENST00000368694 NUP188Q5SRE5 1749 aa24.32■■□□□ 1.48
CHTOP-204ENST00000368694 LOC102724428A0A0B4J2F2 783 aa24.32■■□□□ 1.48
CHTOP-204ENST00000368694 CYP19A1P11511 503 aaPredicted RBP24.32■■□□□ 1.48
CHTOP-204ENST00000368694 SIK1P57059 783 aa24.32■■□□□ 1.48
CHTOP-204ENST00000368694 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
CHTOP-204ENST00000368694 MYD88Q99836 296 aa24.32■■□□□ 1.48
CHTOP-204ENST00000368694 METTL22Q9BUU2 404 aaPredicted RBP24.32■■□□□ 1.48
CHTOP-204ENST00000368694 LRRFIP2Q9Y608 721 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms