RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LAMB4A4D0S4 1761 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
TUBE1-202ENST00000368662 CHPF2Q9P2E5 772 aa15.68■□□□□ 0.1
TUBE1-202ENST00000368662 C5P01031 1676 aa15.68■□□□□ 0.1
TUBE1-202ENST00000368662 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
TUBE1-202ENST00000368662 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
TUBE1-202ENST00000368662 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
TUBE1-202ENST00000368662 PALLDQ8WX93 1383 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 STARD3NLO95772 234 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 FLIIQ13045 1269 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 C20orf194Q5TEA3 1177 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
TUBE1-202ENST00000368662 USP16Q9Y5T5 823 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 RGS12O14924 1447 aa15.67■□□□□ 0.1
TUBE1-202ENST00000368662 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
TUBE1-202ENST00000368662 CLUAP1Q96AJ1 413 aa15.65■□□□□ 0.1
TUBE1-202ENST00000368662 SBF2Q86WG5 1849 aa15.65■□□□□ 0.1
TUBE1-202ENST00000368662 LOC102724428A0A0B4J2F2 783 aa15.65■□□□□ 0.1
TUBE1-202ENST00000368662 SIK1P57059 783 aa15.65■□□□□ 0.1
TUBE1-202ENST00000368662 FKBP5Q13451 457 aaPredicted RBP15.65■□□□□ 0.1
TUBE1-202ENST00000368662 ABCC4O15439 1325 aa15.65■□□□□ 0.1
TUBE1-202ENST00000368662 PDIA6Q15084 440 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 G2E3Q7L622 706 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 PANK1Q8TE04 598 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 AAMPQ13685 434 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 CRBNQ96SW2 442 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 BTAF1O14981 1849 aa15.64■□□□□ 0.09
TUBE1-202ENST00000368662 CICQ96RK0 1608 aaPredicted RBP15.63■□□□□ 0.09
TUBE1-202ENST00000368662 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
TUBE1-202ENST00000368662 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
TUBE1-202ENST00000368662 RLBP1P12271 317 aa15.63■□□□□ 0.09
TUBE1-202ENST00000368662 ATP6V1AP38606 617 aa15.63■□□□□ 0.09
TUBE1-202ENST00000368662 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
TUBE1-202ENST00000368662 SLC4A9Q96Q91 983 aa15.63■□□□□ 0.09
TUBE1-202ENST00000368662 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
TUBE1-202ENST00000368662 CHMP4BQ9H444 224 aaKnown RBP15.62■□□□□ 0.09
TUBE1-202ENST00000368662 DDX19BQ9UMR2 479 aa15.62■□□□□ 0.09
TUBE1-202ENST00000368662 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
TUBE1-202ENST00000368662 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
TUBE1-202ENST00000368662 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
TUBE1-202ENST00000368662 EXOC6Q8TAG9 804 aa15.62■□□□□ 0.09
TUBE1-202ENST00000368662 EP400Q96L91 3159 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 ANXA1P04083 346 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
TUBE1-202ENST00000368662 MYL6BP14649 208 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 PTF1AQ7RTS3 328 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 ITPRIPQ8IWB1 547 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
TUBE1-202ENST00000368662 TJP1Q07157 1748 aa15.6■□□□□ 0.09
TUBE1-202ENST00000368662 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
TUBE1-202ENST00000368662 HMGB2P26583 209 aaKnown RBP15.6■□□□□ 0.09
TUBE1-202ENST00000368662 CCT4P50991 539 aaKnown RBP15.6■□□□□ 0.09
TUBE1-202ENST00000368662 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
TUBE1-202ENST00000368662 LRP10Q7Z4F1 713 aa15.6■□□□□ 0.09
TUBE1-202ENST00000368662 A1BGP04217 495 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 PPP4R2Q9NY27 417 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 NBPF26B4DH59 902 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 TRIM37O94972 964 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 NBPF14Q5TI25 921 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 NBPF10Q6P3W6 841 aaKnown RBP15.59■□□□□ 0.09
TUBE1-202ENST00000368662 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 NBPF15Q8N660 670 aa15.59■□□□□ 0.09
TUBE1-202ENST00000368662 PI4KAP2A4QPH2 592 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 PI4KAP1Q8N8J0 262 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 AIMP1Q12904 312 aaKnown RBP15.58■□□□□ 0.08
TUBE1-202ENST00000368662 ITPK1Q13572 414 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.08
TUBE1-202ENST00000368662 DNAAF4Q8WXU2 420 aa15.58■□□□□ 0.08
TUBE1-202ENST00000368662 F6X3S4 739 aa15.57■□□□□ 0.08
TUBE1-202ENST00000368662 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
TUBE1-202ENST00000368662 SLC4A10Q6U841 1118 aa15.57■□□□□ 0.08
TUBE1-202ENST00000368662 CCDC87Q9NVE4 849 aa15.57■□□□□ 0.08
TUBE1-202ENST00000368662 CCNL1Q9UK58 526 aaPredicted RBP15.57■□□□□ 0.08
TUBE1-202ENST00000368662 LY75O60449 1722 aa15.57■□□□□ 0.08
TUBE1-202ENST00000368662 PIP4K2AP48426 406 aaPredicted RBP15.56■□□□□ 0.08
TUBE1-202ENST00000368662 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 ADCY9O60503 1353 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
TUBE1-202ENST00000368662 SLC27A3Q5K4L6 730 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 RIC3Q7Z5B4 369 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 MAP3K2Q9Y2U5 619 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
TUBE1-202ENST00000368662 PLBD2Q8NHP8 589 aa15.55■□□□□ 0.08
TUBE1-202ENST00000368662 ZBTB1Q9Y2K1 713 aa15.55■□□□□ 0.08
TUBE1-202ENST00000368662 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
TUBE1-202ENST00000368662 CNTNAP4Q9C0A0 1308 aa15.55■□□□□ 0.08
TUBE1-202ENST00000368662 RC3H1Q5TC82 1133 aaKnown RBP15.55■□□□□ 0.08
TUBE1-202ENST00000368662 SRCIN1Q9C0H9 1055 aa15.55■□□□□ 0.08
TUBE1-202ENST00000368662 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-202ENST00000368662 PLSCR1O15162 318 aa15.54■□□□□ 0.08
TUBE1-202ENST00000368662 NEXNQ0ZGT2 675 aa15.54■□□□□ 0.08
TUBE1-202ENST00000368662 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
TUBE1-202ENST00000368662 RREB1Q92766 1687 aa15.54■□□□□ 0.08
TUBE1-202ENST00000368662 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
TUBE1-202ENST00000368662 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
TUBE1-202ENST00000368662 IBTKQ9P2D0 1353 aaPredicted RBP15.53■□□□□ 0.08
TUBE1-202ENST00000368662 BEND3Q5T5X7 828 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms