RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 TMX3Q96JJ7 454 aa18.47■□□□□ 0.55
SLC39A1-204ENST00000368623 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
SLC39A1-204ENST00000368623 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
SLC39A1-204ENST00000368623 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
SLC39A1-204ENST00000368623 NUCB2P80303 420 aa18.47■□□□□ 0.55
SLC39A1-204ENST00000368623 TEFQ10587 303 aa18.46■□□□□ 0.55
SLC39A1-204ENST00000368623 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
SLC39A1-204ENST00000368623 PRPF40AO75400 957 aaKnown RBP18.46■□□□□ 0.55
SLC39A1-204ENST00000368623 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
SLC39A1-204ENST00000368623 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
SLC39A1-204ENST00000368623 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 KLHL40Q2TBA0 621 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 TPRNQ4KMQ1 711 aa18.45■□□□□ 0.54
SLC39A1-204ENST00000368623 PROSER3Q2NL68 480 aa18.44■□□□□ 0.54
SLC39A1-204ENST00000368623 CLEC17AQ6ZS10 378 aa18.44■□□□□ 0.54
SLC39A1-204ENST00000368623 LMBRD1Q9NUN5 540 aa18.44■□□□□ 0.54
SLC39A1-204ENST00000368623 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
SLC39A1-204ENST00000368623 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
SLC39A1-204ENST00000368623 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 MPNDQ8N594 471 aa18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 DTNBO60941 627 aa18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 STAP2Q9UGK3 403 aa18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 BEND3Q5T5X7 828 aa18.43■□□□□ 0.54
SLC39A1-204ENST00000368623 R3HCC1Q9Y3T6 440 aaKnown RBP18.42■□□□□ 0.54
SLC39A1-204ENST00000368623 PXDNQ92626 1479 aa18.42■□□□□ 0.54
SLC39A1-204ENST00000368623 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
SLC39A1-204ENST00000368623 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
SLC39A1-204ENST00000368623 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
SLC39A1-204ENST00000368623 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 NFAT5O94916 1531 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 GCP02774 474 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 GPT2Q8TD30 523 aa18.41■□□□□ 0.54
SLC39A1-204ENST00000368623 POLA2Q14181 598 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 RBSNQ9H1K0 784 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 PA2G4Q9UQ80 394 aaKnown RBP18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 ADCY9O60503 1353 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 PTMSP20962 102 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 MCCP23508 829 aa18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 MSNP26038 577 aaKnown RBP18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 OS9Q13438 667 aaPredicted RBP18.4■□□□□ 0.54
SLC39A1-204ENST00000368623 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
SLC39A1-204ENST00000368623 RNF214Q8ND24 703 aa18.39■□□□□ 0.53
SLC39A1-204ENST00000368623 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
SLC39A1-204ENST00000368623 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
SLC39A1-204ENST00000368623 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 AKAP4Q5JQC9 854 aa18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 CWC27Q6UX04 472 aaKnown RBP18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
SLC39A1-204ENST00000368623 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 ANKRD24Q8TF21 1146 aa18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
SLC39A1-204ENST00000368623 CPA1P15085 419 aa18.36■□□□□ 0.53
SLC39A1-204ENST00000368623 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
SLC39A1-204ENST00000368623 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
SLC39A1-204ENST00000368623 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
SLC39A1-204ENST00000368623 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
SLC39A1-204ENST00000368623 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 TMEM63CQ9P1W3 806 aa18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
SLC39A1-204ENST00000368623 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 PPP1R9BQ96SB3 815 aa18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 HSPA4P34932 840 aa18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
SLC39A1-204ENST00000368623 SGSM2O43147 1006 aa18.33■□□□□ 0.53
SLC39A1-204ENST00000368623 CUL4AQ13619 759 aa18.33■□□□□ 0.53
SLC39A1-204ENST00000368623 SYCE3A1L190 88 aa18.33■□□□□ 0.52
SLC39A1-204ENST00000368623 ANAPC15P60006 121 aa18.33■□□□□ 0.52
SLC39A1-204ENST00000368623 N4BP2Q86UW6 1770 aaPredicted RBP18.33■□□□□ 0.52
SLC39A1-204ENST00000368623 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
SLC39A1-204ENST00000368623 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
SLC39A1-204ENST00000368623 BRD1O95696 1058 aa18.32■□□□□ 0.52
SLC39A1-204ENST00000368623 HOXB7P09629 217 aa18.32■□□□□ 0.52
SLC39A1-204ENST00000368623 AOX1Q06278 1338 aa18.32■□□□□ 0.52
SLC39A1-204ENST00000368623 TPM2P07951 284 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms