RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
UBQLN4-201ENST00000368309 POLA2Q14181 598 aa22.07■■□□□ 1.12
UBQLN4-201ENST00000368309 MCCP23508 829 aa22.07■■□□□ 1.12
UBQLN4-201ENST00000368309 UPF3BQ9BZI7 483 aaKnown RBP22.07■■□□□ 1.12
UBQLN4-201ENST00000368309 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
UBQLN4-201ENST00000368309 KLHL40Q2TBA0 621 aa22.06■■□□□ 1.12
UBQLN4-201ENST00000368309 C1orf141Q5JVX7 400 aa22.06■■□□□ 1.12
UBQLN4-201ENST00000368309 ARHGEF25Q86VW2 580 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 LTN1O94822 1766 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 PROSER3Q2NL68 480 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 ANKRD24Q8TF21 1146 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 ISY1Q9ULR0 285 aaKnown RBP22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 NFAT5O94916 1531 aa22.05■■□□□ 1.12
UBQLN4-201ENST00000368309 PRPF40AO75400 957 aaKnown RBP22.04■■□□□ 1.12
UBQLN4-201ENST00000368309 LMBRD1Q9NUN5 540 aa22.04■■□□□ 1.12
UBQLN4-201ENST00000368309 HOXB7P09629 217 aa22.04■■□□□ 1.12
UBQLN4-201ENST00000368309 PXDNLA1KZ92 1463 aa22.04■■□□□ 1.12
UBQLN4-201ENST00000368309 KIF1BPQ96EK5 621 aa22.03■■□□□ 1.12
UBQLN4-201ENST00000368309 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
UBQLN4-201ENST00000368309 OS9Q13438 667 aaPredicted RBP22.03■■□□□ 1.12
UBQLN4-201ENST00000368309 PI4K2BQ8TCG2 481 aa22.03■■□□□ 1.12
UBQLN4-201ENST00000368309 AMOTQ4VCS5 1084 aa22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 DBF4Q9UBU7 674 aaPredicted RBP22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 MAP3K2Q9Y2U5 619 aa22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 ADCY9O60503 1353 aa22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 CACNA1FO60840 1977 aa22.02■■□□□ 1.12
UBQLN4-201ENST00000368309 C9orf78Q9NZ63 289 aaPredicted RBP22.01■■□□□ 1.11
UBQLN4-201ENST00000368309 GIGYF1O75420 1035 aaPredicted RBP22.01■■□□□ 1.11
UBQLN4-201ENST00000368309 CWF19L2Q2TBE0 894 aaKnown RBP22■■□□□ 1.11
UBQLN4-201ENST00000368309 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
UBQLN4-201ENST00000368309 AOX1Q06278 1338 aa21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 ANAPC15P60006 121 aa21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 PXDNQ92626 1479 aa21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 AIMP1Q12904 312 aaKnown RBP21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 PA2G4Q9UQ80 394 aaKnown RBP21.99■■□□□ 1.11
UBQLN4-201ENST00000368309 MCM2P49736 904 aa21.98■■□□□ 1.11
UBQLN4-201ENST00000368309 RGPD2P0DJD1 1756 aa21.98■■□□□ 1.11
UBQLN4-201ENST00000368309 CWC27Q6UX04 472 aaKnown RBP21.98■■□□□ 1.11
UBQLN4-201ENST00000368309 KRT28Q7Z3Y7 464 aa21.98■■□□□ 1.11
UBQLN4-201ENST00000368309 RBM27Q9P2N5 1060 aaKnown RBP21.97■■□□□ 1.11
UBQLN4-201ENST00000368309 FOXD4L6Q3SYB3 417 aaPredicted RBP21.97■■□□□ 1.11
UBQLN4-201ENST00000368309 FOXD4L3Q6VB84 417 aaPredicted RBP21.97■■□□□ 1.11
UBQLN4-201ENST00000368309 GPT2Q8TD30 523 aa21.97■■□□□ 1.11
UBQLN4-201ENST00000368309 HSPA4P34932 840 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 KSR2Q6VAB6 950 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 SPG7Q9UQ90 795 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 CUL4AQ13619 759 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 ZSCAN23Q3MJ62 389 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 CNTROBQ8N137 903 aa21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 LARP6Q9BRS8 491 aaKnown RBP21.96■■□□□ 1.11
UBQLN4-201ENST00000368309 SGSM2O43147 1006 aa21.95■■□□□ 1.1
UBQLN4-201ENST00000368309 SLC39A6Q13433 755 aa21.95■■□□□ 1.1
UBQLN4-201ENST00000368309 PROSER2Q86WR7 435 aaPredicted RBP21.95■■□□□ 1.1
UBQLN4-201ENST00000368309 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
UBQLN4-201ENST00000368309 HSP90AB4PQ58FF6 505 aa21.95■■□□□ 1.1
UBQLN4-201ENST00000368309 NASPP49321 788 aaPredicted RBP21.94■■□□□ 1.1
UBQLN4-201ENST00000368309 CLASRPQ8N2M8 674 aaKnown RBP21.94■■□□□ 1.1
UBQLN4-201ENST00000368309 NSFL1CQ9UNZ2 370 aaKnown RBP21.94■■□□□ 1.1
UBQLN4-201ENST00000368309 TRIM44Q96DX7 344 aaPredicted RBP21.93■■□□□ 1.1
UBQLN4-201ENST00000368309 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
UBQLN4-201ENST00000368309 DDX17Q92841 729 aaKnown RBP21.92■■□□□ 1.1
UBQLN4-201ENST00000368309 BRD1O95696 1058 aa21.92■■□□□ 1.1
UBQLN4-201ENST00000368309 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
UBQLN4-201ENST00000368309 KIAA1211Q6ZU35 1233 aa21.92■■□□□ 1.1
UBQLN4-201ENST00000368309 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 SNX14Q9Y5W7 946 aa21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 RAD50Q92878 1312 aa21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 GLRX3O76003 335 aaKnown RBP21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 INTS4Q96HW7 963 aaKnown RBP21.91■■□□□ 1.1
UBQLN4-201ENST00000368309 MYL6BP14649 208 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 ZNF445P59923 1031 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 MTX1Q13505 466 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 HYPKQ9NX55 129 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 IFIT2P09913 472 aaKnown RBP21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 SUCLG2Q96I99 432 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 KDM3BQ7LBC6 1761 aa21.9■■□□□ 1.1
UBQLN4-201ENST00000368309 CPA1P15085 419 aa21.89■■□□□ 1.1
UBQLN4-201ENST00000368309 ESPNB1AK53 854 aa21.89■■□□□ 1.09
UBQLN4-201ENST00000368309 PRIM1P49642 420 aaKnown RBP21.89■■□□□ 1.09
UBQLN4-201ENST00000368309 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
UBQLN4-201ENST00000368309 KAZALD1Q96I82 304 aa21.89■■□□□ 1.09
UBQLN4-201ENST00000368309 AACSQ86V21 672 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 ECHDC1Q9NTX5 307 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 TMEM63CQ9P1W3 806 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 GRM8O00222 908 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 NFATC2IPQ8NCF5 419 aa21.88■■□□□ 1.09
UBQLN4-201ENST00000368309 LINS1Q8NG48 757 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms