RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
SNHG28-201ENST00000368102 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
SNHG28-201ENST00000368102 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
SNHG28-201ENST00000368102 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
SNHG28-201ENST00000368102 PXDNQ92626 1479 aa17.2■□□□□ 0.34
SNHG28-201ENST00000368102 TRPM3Q9HCF6 1732 aaPredicted RBP17.19■□□□□ 0.34
SNHG28-201ENST00000368102 ATF3P18847 181 aa17.19■□□□□ 0.34
SNHG28-201ENST00000368102 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
SNHG28-201ENST00000368102 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
SNHG28-201ENST00000368102 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
SNHG28-201ENST00000368102 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 PPP1R9BQ96SB3 815 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 CHMP4AQ9BY43 222 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 SRCIN1Q9C0H9 1055 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
SNHG28-201ENST00000368102 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 PALD1Q9ULE6 856 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
SNHG28-201ENST00000368102 ANXA1P04083 346 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 IL25Q9H293 177 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 ERBB3P21860 1342 aa17.17■□□□□ 0.34
SNHG28-201ENST00000368102 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
SNHG28-201ENST00000368102 CACNA1FO60840 1977 aa17.16■□□□□ 0.34
SNHG28-201ENST00000368102 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
SNHG28-201ENST00000368102 MST1RQ04912 1400 aa17.16■□□□□ 0.34
SNHG28-201ENST00000368102 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SNHG28-201ENST00000368102 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SNHG28-201ENST00000368102 TRIM6-TRIM34B2RNG4 842 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 ERC2O15083 957 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
SNHG28-201ENST00000368102 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 PKNOX2Q96KN3 472 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
SNHG28-201ENST00000368102 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.33
SNHG28-201ENST00000368102 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
SNHG28-201ENST00000368102 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
SNHG28-201ENST00000368102 BEND3Q5T5X7 828 aa17.14■□□□□ 0.33
SNHG28-201ENST00000368102 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
SNHG28-201ENST00000368102 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
SNHG28-201ENST00000368102 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
SNHG28-201ENST00000368102 MX1P20591 662 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
SNHG28-201ENST00000368102 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
SNHG28-201ENST00000368102 NASPP49321 788 aaPredicted RBP17.13■□□□□ 0.33
SNHG28-201ENST00000368102 NEK4P51957 841 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
SNHG28-201ENST00000368102 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
SNHG28-201ENST00000368102 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
SNHG28-201ENST00000368102 CAVIN1Q6NZI2 390 aaKnown RBP17.12■□□□□ 0.33
SNHG28-201ENST00000368102 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 REC8O95072 547 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
SNHG28-201ENST00000368102 ADCY9O60503 1353 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 DTNBO60941 627 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
SNHG28-201ENST00000368102 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
SNHG28-201ENST00000368102 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 ESYT1Q9BSJ8 1104 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 ST18O60284 1047 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
SNHG28-201ENST00000368102 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
SNHG28-201ENST00000368102 TERF1P54274 439 aa17.1■□□□□ 0.33
SNHG28-201ENST00000368102 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
SNHG28-201ENST00000368102 LMBRD1Q9NUN5 540 aa17.1■□□□□ 0.33
SNHG28-201ENST00000368102 NSFL1CQ9UNZ2 370 aaKnown RBP17.1■□□□□ 0.33
SNHG28-201ENST00000368102 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
SNHG28-201ENST00000368102 POLA2Q14181 598 aa17.1■□□□□ 0.33
SNHG28-201ENST00000368102 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
SNHG28-201ENST00000368102 DCCP43146 1447 aa17.1■□□□□ 0.33
SNHG28-201ENST00000368102 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
SNHG28-201ENST00000368102 ZNF445P59923 1031 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 HS1BP3Q53T59 392 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 CHMLP26374 656 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 ZMYND15Q9H091 742 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 PDCL3Q9H2J4 239 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 STAP2Q9UGK3 403 aa17.09■□□□□ 0.33
SNHG28-201ENST00000368102 OFD1O75665 1012 aa17.08■□□□□ 0.33
SNHG28-201ENST00000368102 GPT2Q8TD30 523 aa17.08■□□□□ 0.33
SNHG28-201ENST00000368102 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.33
SNHG28-201ENST00000368102 RGPD5Q99666 1765 aa17.08■□□□□ 0.32
SNHG28-201ENST00000368102 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms