RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
VAMP4-202ENST00000367740 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
VAMP4-202ENST00000367740 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
VAMP4-202ENST00000367740 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
VAMP4-202ENST00000367740 AIDAQ96BJ3 306 aa20.53■□□□□ 0.88
VAMP4-202ENST00000367740 ABHD8Q96I13 439 aa20.53■□□□□ 0.88
VAMP4-202ENST00000367740 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
VAMP4-202ENST00000367740 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
VAMP4-202ENST00000367740 LBX1P52954 281 aa20.51■□□□□ 0.87
VAMP4-202ENST00000367740 DPY19L2Q6NUT2 758 aa20.51■□□□□ 0.87
VAMP4-202ENST00000367740 PTCD1O75127 700 aaKnown RBP20.5■□□□□ 0.87
VAMP4-202ENST00000367740 TTLL6Q8N841 843 aa20.5■□□□□ 0.87
VAMP4-202ENST00000367740 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
VAMP4-202ENST00000367740 COL11A2P13942 1736 aaPredicted RBP20.5■□□□□ 0.87
VAMP4-202ENST00000367740 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
VAMP4-202ENST00000367740 VEGFBP49765 207 aa20.49■□□□□ 0.87
VAMP4-202ENST00000367740 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
VAMP4-202ENST00000367740 WBP1LQ9NX94 342 aa20.49■□□□□ 0.87
VAMP4-202ENST00000367740 CARMIL3Q8ND23 1372 aa20.48■□□□□ 0.87
VAMP4-202ENST00000367740 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
VAMP4-202ENST00000367740 INTS5Q6P9B9 1019 aaKnown RBP20.47■□□□□ 0.87
VAMP4-202ENST00000367740 SCN4AP35499 1836 aa20.47■□□□□ 0.87
VAMP4-202ENST00000367740 TNRC18O15417 2968 aaPredicted RBP20.47■□□□□ 0.87
VAMP4-202ENST00000367740 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
VAMP4-202ENST00000367740 HSPA8P11142 646 aaKnown RBP20.46■□□□□ 0.87
VAMP4-202ENST00000367740 CABP4P57796 275 aa20.46■□□□□ 0.87
VAMP4-202ENST00000367740 NFIXQ14938 502 aa20.46■□□□□ 0.87
VAMP4-202ENST00000367740 ZPR1O75312 459 aa20.45■□□□□ 0.86
VAMP4-202ENST00000367740 MLLT1Q03111 559 aaPredicted RBP20.45■□□□□ 0.86
VAMP4-202ENST00000367740 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
VAMP4-202ENST00000367740 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
VAMP4-202ENST00000367740 CACNA1SQ13698 1873 aa20.45■□□□□ 0.86
VAMP4-202ENST00000367740 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
VAMP4-202ENST00000367740 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
VAMP4-202ENST00000367740 CARD14Q9BXL6 1004 aa20.44■□□□□ 0.86
VAMP4-202ENST00000367740 SOS1Q07889 1333 aaPredicted RBP20.44■□□□□ 0.86
VAMP4-202ENST00000367740 THSD7BQ9C0I4 1608 aa20.43■□□□□ 0.86
VAMP4-202ENST00000367740 DDNO94850 711 aaPredicted RBP20.43■□□□□ 0.86
VAMP4-202ENST00000367740 C1QBPQ07021 282 aaKnown RBP20.43■□□□□ 0.86
VAMP4-202ENST00000367740 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
VAMP4-202ENST00000367740 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
VAMP4-202ENST00000367740 SERPINB2P05120 415 aa20.42■□□□□ 0.86
VAMP4-202ENST00000367740 RGS19P49795 217 aa20.42■□□□□ 0.86
VAMP4-202ENST00000367740 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
VAMP4-202ENST00000367740 H0YIN7 160 aa20.41■□□□□ 0.86
VAMP4-202ENST00000367740 ZNF530Q6P9A1 599 aaPredicted RBP20.41■□□□□ 0.86
VAMP4-202ENST00000367740 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
VAMP4-202ENST00000367740 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
VAMP4-202ENST00000367740 COL15A1P39059 1388 aa20.41■□□□□ 0.86
VAMP4-202ENST00000367740 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
VAMP4-202ENST00000367740 NARFQ9UHQ1 456 aa20.4■□□□□ 0.86
VAMP4-202ENST00000367740 LTBP3Q9NS15 1303 aa20.39■□□□□ 0.85
VAMP4-202ENST00000367740 C21orf2O43822 256 aa20.39■□□□□ 0.85
VAMP4-202ENST00000367740 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
VAMP4-202ENST00000367740 NFATC2IPQ8NCF5 419 aa20.39■□□□□ 0.85
VAMP4-202ENST00000367740 CCDC85CA6NKD9 419 aa20.38■□□□□ 0.85
VAMP4-202ENST00000367740 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
VAMP4-202ENST00000367740 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
VAMP4-202ENST00000367740 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
VAMP4-202ENST00000367740 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
VAMP4-202ENST00000367740 SLX4Q8IY92 1834 aa20.38■□□□□ 0.85
VAMP4-202ENST00000367740 RASSF10A6NK89 507 aa20.37■□□□□ 0.85
VAMP4-202ENST00000367740 MTHFSP49914 203 aa20.37■□□□□ 0.85
VAMP4-202ENST00000367740 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
VAMP4-202ENST00000367740 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
VAMP4-202ENST00000367740 IQCA1LA6NCM1 817 aa20.36■□□□□ 0.85
VAMP4-202ENST00000367740 L3MBTL3Q96JM7 780 aaPredicted RBP20.36■□□□□ 0.85
VAMP4-202ENST00000367740 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
VAMP4-202ENST00000367740 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.854e-6■□□□□ 9.9
VAMP4-202ENST00000367740 CYP19A1P11511 503 aaPredicted RBP20.34■□□□□ 0.85
VAMP4-202ENST00000367740 MAP2K1Q02750 393 aaPredicted RBP20.34■□□□□ 0.85
VAMP4-202ENST00000367740 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
VAMP4-202ENST00000367740 ZBTB1Q9Y2K1 713 aa20.34■□□□□ 0.85
VAMP4-202ENST00000367740 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
VAMP4-202ENST00000367740 DEFB115Q30KQ5 88 aa20.33■□□□□ 0.85
VAMP4-202ENST00000367740 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
VAMP4-202ENST00000367740 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
VAMP4-202ENST00000367740 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
VAMP4-202ENST00000367740 MRC1P22897 1456 aa20.31■□□□□ 0.84
VAMP4-202ENST00000367740 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
VAMP4-202ENST00000367740 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
VAMP4-202ENST00000367740 PDE6BP35913 854 aa20.29■□□□□ 0.84
VAMP4-202ENST00000367740 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
VAMP4-202ENST00000367740 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
VAMP4-202ENST00000367740 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
VAMP4-202ENST00000367740 PDE4DIPQ5VU43 2346 aa20.28■□□□□ 0.84
VAMP4-202ENST00000367740 CDCA8Q53HL2 280 aa20.28■□□□□ 0.84
VAMP4-202ENST00000367740 PRR5LQ6MZQ0 368 aa20.28■□□□□ 0.84
VAMP4-202ENST00000367740 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
VAMP4-202ENST00000367740 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
VAMP4-202ENST00000367740 TNNT2P45379 298 aaPredicted RBP20.27■□□□□ 0.84
VAMP4-202ENST00000367740 TBC1D9BQ66K14 1250 aa20.26■□□□□ 0.83
VAMP4-202ENST00000367740 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
VAMP4-202ENST00000367740 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
VAMP4-202ENST00000367740 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
VAMP4-202ENST00000367740 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
VAMP4-202ENST00000367740 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
VAMP4-202ENST00000367740 TRPM7Q96QT4 1865 aa20.25■□□□□ 0.83
VAMP4-202ENST00000367740 EPHX2P34913 555 aa20.25■□□□□ 0.83
VAMP4-202ENST00000367740 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms