RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RRP7AQ9Y3A4 280 aaKnown RBP19.43■□□□□ 0.7
SF3B5-201ENST00000367569 PXDNLA1KZ92 1463 aa19.42■□□□□ 0.7
SF3B5-201ENST00000367569 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
SF3B5-201ENST00000367569 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
SF3B5-201ENST00000367569 KCNQ3O43525 872 aa19.41■□□□□ 0.7
SF3B5-201ENST00000367569 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
SF3B5-201ENST00000367569 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
SF3B5-201ENST00000367569 SRP68Q9UHB9 627 aaKnown RBP19.41■□□□□ 0.7
SF3B5-201ENST00000367569 ADCY9O60503 1353 aa19.41■□□□□ 0.7
SF3B5-201ENST00000367569 C10orf71Q711Q0 1435 aa19.41■□□□□ 0.7
SF3B5-201ENST00000367569 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
SF3B5-201ENST00000367569 TGFB2P61812 414 aa19.4■□□□□ 0.7
SF3B5-201ENST00000367569 INTS5Q6P9B9 1019 aaKnown RBP19.4■□□□□ 0.7
SF3B5-201ENST00000367569 ANP32CO43423 234 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 TTC5Q8N0Z6 440 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 CCDC87Q9NVE4 849 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 ADAMTS8Q9UP79 889 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 PARP3Q9Y6F1 533 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 LAMB4A4D0S4 1761 aa19.39■□□□□ 0.69
SF3B5-201ENST00000367569 FKBP8Q14318 412 aa19.38■□□□□ 0.69
SF3B5-201ENST00000367569 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
SF3B5-201ENST00000367569 USP42Q9H9J4 1324 aaKnown RBP19.38■□□□□ 0.69
SF3B5-201ENST00000367569 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
SF3B5-201ENST00000367569 DPEP1P16444 411 aa19.37■□□□□ 0.69
SF3B5-201ENST00000367569 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
SF3B5-201ENST00000367569 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
SF3B5-201ENST00000367569 GPBP1L1Q9HC44 474 aaPredicted RBP19.37■□□□□ 0.69
SF3B5-201ENST00000367569 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
SF3B5-201ENST00000367569 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
SF3B5-201ENST00000367569 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
SF3B5-201ENST00000367569 DDR1Q08345 913 aa19.35■□□□□ 0.69
SF3B5-201ENST00000367569 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
SF3B5-201ENST00000367569 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
SF3B5-201ENST00000367569 RIPK4P57078 832 aa19.34■□□□□ 0.69
SF3B5-201ENST00000367569 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
SF3B5-201ENST00000367569 BRCA1P38398 1863 aaKnown RBP19.33■□□□□ 0.69
SF3B5-201ENST00000367569 SOS1Q07889 1333 aaPredicted RBP19.33■□□□□ 0.69
SF3B5-201ENST00000367569 PRAMEF22A3QJZ6 481 aa19.33■□□□□ 0.68
SF3B5-201ENST00000367569 KCNA3P22001 575 aa19.33■□□□□ 0.68
SF3B5-201ENST00000367569 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
SF3B5-201ENST00000367569 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
SF3B5-201ENST00000367569 TM4SF1P30408 202 aa19.32■□□□□ 0.68
SF3B5-201ENST00000367569 USPL1Q5W0Q7 1092 aa19.32■□□□□ 0.68
SF3B5-201ENST00000367569 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
SF3B5-201ENST00000367569 ZBTB1Q9Y2K1 713 aa19.32■□□□□ 0.68
SF3B5-201ENST00000367569 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
SF3B5-201ENST00000367569 HTATSF1O43719 755 aaKnown RBP19.31■□□□□ 0.68
SF3B5-201ENST00000367569 ZPR1O75312 459 aa19.31■□□□□ 0.68
SF3B5-201ENST00000367569 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
SF3B5-201ENST00000367569 POLRMTO00411 1230 aaKnown RBP19.3■□□□□ 0.68
SF3B5-201ENST00000367569 ARHGAP27Q6ZUM4 889 aa19.3■□□□□ 0.68
SF3B5-201ENST00000367569 VSIG10Q8N0Z9 540 aa19.3■□□□□ 0.68
SF3B5-201ENST00000367569 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
SF3B5-201ENST00000367569 ZNF330Q9Y3S2 320 aaPredicted RBP19.3■□□□□ 0.68
SF3B5-201ENST00000367569 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
SF3B5-201ENST00000367569 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
SF3B5-201ENST00000367569 COL15A1P39059 1388 aa19.29■□□□□ 0.68
SF3B5-201ENST00000367569 BCORQ6W2J9 1755 aa19.29■□□□□ 0.68
SF3B5-201ENST00000367569 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
SF3B5-201ENST00000367569 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
SF3B5-201ENST00000367569 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
SF3B5-201ENST00000367569 ARFGEF1Q9Y6D6 1849 aa19.28■□□□□ 0.68
SF3B5-201ENST00000367569 CEP350Q5VT06 3117 aa19.27■□□□□ 0.68
SF3B5-201ENST00000367569 CHRNA5P30532 468 aa19.27■□□□□ 0.68
SF3B5-201ENST00000367569 NFIXQ14938 502 aa19.27■□□□□ 0.68
SF3B5-201ENST00000367569 AFDNP55196 1824 aaKnown RBP19.26■□□□□ 0.67
SF3B5-201ENST00000367569 APAF1O14727 1248 aa19.26■□□□□ 0.67
SF3B5-201ENST00000367569 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
SF3B5-201ENST00000367569 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
SF3B5-201ENST00000367569 KIF3CO14782 793 aa19.25■□□□□ 0.67
SF3B5-201ENST00000367569 A1BGP04217 495 aa19.25■□□□□ 0.67
SF3B5-201ENST00000367569 LAS1LQ9Y4W2 734 aaKnown RBP19.25■□□□□ 0.67
SF3B5-201ENST00000367569 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
SF3B5-201ENST00000367569 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
SF3B5-201ENST00000367569 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
SF3B5-201ENST00000367569 STARD3NLO95772 234 aa19.23■□□□□ 0.67
SF3B5-201ENST00000367569 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
SF3B5-201ENST00000367569 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
SF3B5-201ENST00000367569 NRXN2Q9P2S2 1712 aa19.22■□□□□ 0.67
SF3B5-201ENST00000367569 SERPINB2P05120 415 aa19.22■□□□□ 0.67
SF3B5-201ENST00000367569 C9orf131Q5VYM1 1079 aa19.21■□□□□ 0.67
SF3B5-201ENST00000367569 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
SF3B5-201ENST00000367569 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
SF3B5-201ENST00000367569 HSPA6P17066 643 aa19.2■□□□□ 0.66
SF3B5-201ENST00000367569 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
SF3B5-201ENST00000367569 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
SF3B5-201ENST00000367569 A0A087WZG4 1122 aa19.19■□□□□ 0.66
SF3B5-201ENST00000367569 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
SF3B5-201ENST00000367569 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
SF3B5-201ENST00000367569 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
SF3B5-201ENST00000367569 NMRK2Q9NPI5 230 aa19.18■□□□□ 0.66
SF3B5-201ENST00000367569 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
SF3B5-201ENST00000367569 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
SF3B5-201ENST00000367569 NBPF26B4DH59 902 aa19.17■□□□□ 0.66
SF3B5-201ENST00000367569 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
SF3B5-201ENST00000367569 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
SF3B5-201ENST00000367569 NBPF10Q6P3W6 841 aaKnown RBP19.17■□□□□ 0.66
SF3B5-201ENST00000367569 NBPF15Q8N660 670 aa19.17■□□□□ 0.66
SF3B5-201ENST00000367569 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
SF3B5-201ENST00000367569 SBF1O95248 1867 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms