RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 MRC1P22897 1456 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
NUP43-202ENST00000367402 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
NUP43-202ENST00000367402 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
NUP43-202ENST00000367402 KCNQ3O43525 872 aa12.94□□□□□ -0.34
NUP43-202ENST00000367402 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
NUP43-202ENST00000367402 RREB1Q92766 1687 aa12.93□□□□□ -0.34
NUP43-202ENST00000367402 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
NUP43-202ENST00000367402 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
NUP43-202ENST00000367402 AK7Q96M32 723 aa12.93□□□□□ -0.34
NUP43-202ENST00000367402 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
NUP43-202ENST00000367402 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
NUP43-202ENST00000367402 NUP188Q5SRE5 1749 aa12.92□□□□□ -0.34
NUP43-202ENST00000367402 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
NUP43-202ENST00000367402 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
NUP43-202ENST00000367402 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
NUP43-202ENST00000367402 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
NUP43-202ENST00000367402 DNAJC10Q8IXB1 793 aa12.91□□□□□ -0.34
NUP43-202ENST00000367402 LY75O60449 1722 aa12.91□□□□□ -0.34
NUP43-202ENST00000367402 GNPATO15228 680 aa12.9□□□□□ -0.34
NUP43-202ENST00000367402 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
NUP43-202ENST00000367402 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
NUP43-202ENST00000367402 PHF14O94880 888 aa12.89□□□□□ -0.35
NUP43-202ENST00000367402 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
NUP43-202ENST00000367402 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
NUP43-202ENST00000367402 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
NUP43-202ENST00000367402 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
NUP43-202ENST00000367402 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
NUP43-202ENST00000367402 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 CHL1O00533 1208 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 STARD3NLO95772 234 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
NUP43-202ENST00000367402 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
NUP43-202ENST00000367402 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
NUP43-202ENST00000367402 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
NUP43-202ENST00000367402 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
NUP43-202ENST00000367402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
NUP43-202ENST00000367402 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
NUP43-202ENST00000367402 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
NUP43-202ENST00000367402 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
NUP43-202ENST00000367402 RPS6KA4O75676 772 aa12.86□□□□□ -0.35
NUP43-202ENST00000367402 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
NUP43-202ENST00000367402 GNAI1P63096 354 aa12.86□□□□□ -0.35
NUP43-202ENST00000367402 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
NUP43-202ENST00000367402 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
NUP43-202ENST00000367402 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
NUP43-202ENST00000367402 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
NUP43-202ENST00000367402 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
NUP43-202ENST00000367402 A1BGP04217 495 aa12.85□□□□□ -0.35
NUP43-202ENST00000367402 SSFA2P28290 1259 aa12.85□□□□□ -0.35
NUP43-202ENST00000367402 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
NUP43-202ENST00000367402 C5P01031 1676 aa12.85□□□□□ -0.35
NUP43-202ENST00000367402 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
NUP43-202ENST00000367402 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
NUP43-202ENST00000367402 ZNF853P0CG23 659 aa12.84□□□□□ -0.35
NUP43-202ENST00000367402 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
NUP43-202ENST00000367402 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
NUP43-202ENST00000367402 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
NUP43-202ENST00000367402 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
NUP43-202ENST00000367402 RFC4P35249 363 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
NUP43-202ENST00000367402 SLC16A10Q8TF71 515 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 MTFR1LQ9H019 292 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 SPON1Q9HCB6 807 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
NUP43-202ENST00000367402 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.36
NUP43-202ENST00000367402 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
NUP43-202ENST00000367402 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
NUP43-202ENST00000367402 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
NUP43-202ENST00000367402 TSR2Q969E8 191 aaKnown RBP12.82□□□□□ -0.36
NUP43-202ENST00000367402 ARXQ96QS3 562 aa12.82□□□□□ -0.36
NUP43-202ENST00000367402 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 TJP1Q07157 1748 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
NUP43-202ENST00000367402 IL16Q14005 1332 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
NUP43-202ENST00000367402 A0A087WZG4 1122 aa12.8□□□□□ -0.36
NUP43-202ENST00000367402 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
NUP43-202ENST00000367402 ZPR1O75312 459 aa12.8□□□□□ -0.36
NUP43-202ENST00000367402 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
NUP43-202ENST00000367402 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
NUP43-202ENST00000367402 DUSP27Q5VZP5 1158 aa12.8□□□□□ -0.36
NUP43-202ENST00000367402 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
NUP43-202ENST00000367402 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
NUP43-202ENST00000367402 POLD1P28340 1107 aa12.79□□□□□ -0.36
NUP43-202ENST00000367402 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms