RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RGPD8O14715 1765 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-202ENST00000367279 CPA1P15085 419 aa14.92□□□□□ -0.02
PTPN7-202ENST00000367279 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-202ENST00000367279 HSP90AA2PQ14568 343 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-202ENST00000367279 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
PTPN7-202ENST00000367279 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
PTPN7-202ENST00000367279 BRD1O95696 1058 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 MBD3O95983 291 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 C9orf78Q9NZ63 289 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-202ENST00000367279 TBX22Q9Y458 520 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 CNTROBQ8N137 903 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 SSH2Q76I76 1423 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 GADD45BO75293 160 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-202ENST00000367279 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-202ENST00000367279 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-202ENST00000367279 DNAAF4Q8WXU2 420 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 DIAPH3Q9NSV4 1193 aa14.91□□□□□ -0.02
PTPN7-202ENST00000367279 BTBD11A6QL63 1104 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 ANAPC15P60006 121 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 PSME1Q06323 249 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 RGPD1P0DJD0 1748 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 PLCB2Q00722 1185 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 KCNJ4P48050 445 aa14.9□□□□□ -0.02
PTPN7-202ENST00000367279 AIMP1Q12904 312 aaKnown RBP14.9□□□□□ -0.02
PTPN7-202ENST00000367279 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
PTPN7-202ENST00000367279 FMN2Q9NZ56 1722 aa14.89□□□□□ -0.03
PTPN7-202ENST00000367279 RAB11FIP3O75154 756 aa14.89□□□□□ -0.03
PTPN7-202ENST00000367279 ESCO1Q5FWF5 840 aa14.89□□□□□ -0.03
PTPN7-202ENST00000367279 CUL4AQ13619 759 aa14.89□□□□□ -0.03
PTPN7-202ENST00000367279 USP48Q86UV5 1035 aa14.89□□□□□ -0.03
PTPN7-202ENST00000367279 SYAP1Q96A49 352 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-202ENST00000367279 PA2G4Q9UQ80 394 aaKnown RBP14.89□□□□□ -0.03
PTPN7-202ENST00000367279 TSPY26PQ9H489 355 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
PTPN7-202ENST00000367279 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
PTPN7-202ENST00000367279 FIBPO43427 364 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 HSPA4P34932 840 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 AK2P54819 239 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
PTPN7-202ENST00000367279 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
PTPN7-202ENST00000367279 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
PTPN7-202ENST00000367279 IFIT2P09913 472 aaKnown RBP14.87□□□□□ -0.03
PTPN7-202ENST00000367279 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
PTPN7-202ENST00000367279 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
PTPN7-202ENST00000367279 SMC3Q9UQE7 1217 aa14.87□□□□□ -0.03
PTPN7-202ENST00000367279 CNPY2Q9Y2B0 182 aa14.87□□□□□ -0.03
PTPN7-202ENST00000367279 PI4K2BQ8TCG2 481 aa14.87□□□□□ -0.03
PTPN7-202ENST00000367279 INTS4Q96HW7 963 aaKnown RBP14.87□□□□□ -0.03
PTPN7-202ENST00000367279 SGSM2O43147 1006 aa14.86□□□□□ -0.03
PTPN7-202ENST00000367279 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
PTPN7-202ENST00000367279 MAP3K2Q9Y2U5 619 aa14.86□□□□□ -0.03
PTPN7-202ENST00000367279 CWF19L2Q2TBE0 894 aaKnown RBP14.86□□□□□ -0.03
PTPN7-202ENST00000367279 PRPF40BQ6NWY9 871 aaKnown RBP14.86□□□□□ -0.03
PTPN7-202ENST00000367279 CCDC83Q8IWF9 413 aa14.86□□□□□ -0.03
PTPN7-202ENST00000367279 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
PTPN7-202ENST00000367279 SIL1Q9H173 461 aa14.86□□□□□ -0.03
PTPN7-202ENST00000367279 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
PTPN7-202ENST00000367279 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
PTPN7-202ENST00000367279 PIK3C2AO00443 1686 aa14.85□□□□□ -0.03
PTPN7-202ENST00000367279 RAD50Q92878 1312 aa14.85□□□□□ -0.03
PTPN7-202ENST00000367279 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-202ENST00000367279 HSP90AB4PQ58FF6 505 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-202ENST00000367279 AACSQ86V21 672 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 CHMP3Q9Y3E7 222 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 POLA2Q14181 598 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 PROSER3Q2NL68 480 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 IP6K1Q92551 441 aa14.84□□□□□ -0.03
PTPN7-202ENST00000367279 PLEKHO1Q53GL0 409 aaPredicted RBP14.83□□□□□ -0.03
PTPN7-202ENST00000367279 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.03
PTPN7-202ENST00000367279 ARID3AQ99856 593 aa14.83□□□□□ -0.03
PTPN7-202ENST00000367279 CCDC8Q9H0W5 538 aaPredicted RBP14.83□□□□□ -0.03
PTPN7-202ENST00000367279 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.03
PTPN7-202ENST00000367279 AOX1Q06278 1338 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
PTPN7-202ENST00000367279 PHF14O94880 888 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 GPATCH3Q96I76 525 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
PTPN7-202ENST00000367279 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.04
PTPN7-202ENST00000367279 PTH1RQ03431 593 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 CCDC39Q9UFE4 941 aa14.83□□□□□ -0.04
PTPN7-202ENST00000367279 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.83□□□□□ -0.04
PTPN7-202ENST00000367279 STX6O43752 255 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 OFD1O75665 1012 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 SYT1P21579 422 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 NOL7Q9UMY1 257 aaKnown RBP14.82□□□□□ -0.04
PTPN7-202ENST00000367279 LARGE1O95461 756 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 TPM2P07951 284 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms