RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 NLRP6P59044 892 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 RRAGDQ9NQL2 400 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-209ENST00000367257 CPSF2Q9P2I0 782 aaKnown RBP10.38□□□□□ -0.75
SYNE1-209ENST00000367257 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-209ENST00000367257 LIG1P18858 919 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 KIF1BPQ96EK5 621 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 RAD21O60216 631 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
SYNE1-209ENST00000367257 KDM6BO15054 1643 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 KIF5CO60282 957 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 NKTRP30414 1462 aaKnown RBP10.37□□□□□ -0.75
SYNE1-209ENST00000367257 HMOX1P09601 288 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 PSMD1Q99460 953 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 NAA15Q9BXJ9 866 aaKnown RBP10.37□□□□□ -0.75
SYNE1-209ENST00000367257 RAB34Q9BZG1 259 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-209ENST00000367257 MYZAPP0CAP1 466 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 SLFN5Q08AF3 891 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 SPA17Q15506 151 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
SYNE1-209ENST00000367257 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 NLRP2Q9NX02 1062 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 KIDINS220Q9ULH0 1771 aa10.37□□□□□ -0.75
SYNE1-209ENST00000367257 TERF1P54274 439 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 KANK3Q6NY19 840 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 FEZ1Q99689 392 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 TSG101Q99816 390 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 ABCC1P33527 1531 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 IVLP07476 585 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 BMS1Q14692 1282 aaKnown RBP10.36□□□□□ -0.75
SYNE1-209ENST00000367257 LRRC27Q9C0I9 530 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 CNNM1Q9NRU3 951 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 MBD5Q9P267 1494 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 USO1O60763 962 aaKnown RBP10.36□□□□□ -0.75
SYNE1-209ENST00000367257 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNE1-209ENST00000367257 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
SYNE1-209ENST00000367257 A0A1B0GUL7 405 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 IL16Q14005 1332 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 ARHGEF12Q9NZN5 1544 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 PAXBP1Q9Y5B6 917 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 ENOX2Q16206 610 aaKnown RBP10.35□□□□□ -0.75
SYNE1-209ENST00000367257 GIGYF2Q6Y7W6 1299 aaKnown RBP10.35□□□□□ -0.75
SYNE1-209ENST00000367257 TAOK3Q9H2K8 898 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 PTPRCP08575 1304 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 SMC1AQ14683 1233 aaKnown RBP10.35□□□□□ -0.75
SYNE1-209ENST00000367257 KRI1Q8N9T8 703 aaKnown RBP10.35□□□□□ -0.75
SYNE1-209ENST00000367257 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 CABP2Q9NPB3 220 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 OGFRQ9NZT2 677 aa10.35□□□□□ -0.75
SYNE1-209ENST00000367257 TUBBP07437 444 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 FAM114A1Q8IWE2 563 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 SPC24Q8NBT2 197 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 KCNH5Q8NCM2 988 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 CNPY4Q8N129 248 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 REREQ9P2R6 1566 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 STAMBPO95630 424 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 BMP15O95972 392 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 TNIP1Q15025 636 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 ZMYM4Q5VZL5 1548 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-209ENST00000367257 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
SYNE1-209ENST00000367257 PAFAH1B1P43034 410 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 DMTNQ08495 405 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 CCDC171Q6TFL3 1326 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
SYNE1-209ENST00000367257 LRCH2Q5VUJ6 765 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 HOOK3Q86VS8 718 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 TANGO6Q9C0B7 1094 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 EHMT1Q9H9B1 1298 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 HMG20BQ9P0W2 317 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 GPATCH8Q9UKJ3 1502 aaKnown RBP10.33□□□□□ -0.76
SYNE1-209ENST00000367257 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
SYNE1-209ENST00000367257 CASQ1P31415 396 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
SYNE1-209ENST00000367257 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
SYNE1-209ENST00000367257 YEATS4O95619 227 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 FAM69CQ0P6D2 419 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 C10orf67Q8IYJ2 551 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 SRRTQ9BXP5 876 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms