RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 POLKQ9UBT6 870 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 EVI5LQ96CN4 794 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 TESK2Q96S53 571 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 RUFY1Q96T51 708 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 MKNK2Q9HBH9 465 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 BCL11BQ9C0K0 894 aaPredicted RBP19.4■□□□□ 0.7
SCAF8-201ENST00000367178 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
SCAF8-201ENST00000367178 CEP57L1Q8IYX8 460 aa19.4■□□□□ 0.7
SCAF8-201ENST00000367178 HMGB1P09429 215 aaKnown RBP19.39■□□□□ 0.69
SCAF8-201ENST00000367178 WDR62O43379 1518 aa19.39■□□□□ 0.69
SCAF8-201ENST00000367178 SSBP05455 408 aaKnown RBP eCLIP19.39■□□□□ 0.69
SCAF8-201ENST00000367178 ZNHIT6Q9NWK9 470 aaKnown RBP19.39■□□□□ 0.69
SCAF8-201ENST00000367178 ZRANB1Q9UGI0 708 aa19.39■□□□□ 0.69
SCAF8-201ENST00000367178 CCP110O43303 1012 aa19.39■□□□□ 0.69
SCAF8-201ENST00000367178 ZNF213O14771 459 aa19.38■□□□□ 0.69
SCAF8-201ENST00000367178 GRPEL1Q9HAV7 217 aa19.38■□□□□ 0.69
SCAF8-201ENST00000367178 BMP2KQ9NSY1 1161 aaPredicted RBP19.38■□□□□ 0.69
SCAF8-201ENST00000367178 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
SCAF8-201ENST00000367178 CCDC196A0A1B0GTZ2 297 aa19.38■□□□□ 0.69
SCAF8-201ENST00000367178 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
SCAF8-201ENST00000367178 RPGRQ92834 1020 aaKnown RBP19.38■□□□□ 0.69
SCAF8-201ENST00000367178 ACBD3Q9H3P7 528 aa19.38■□□□□ 0.69
SCAF8-201ENST00000367178 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 PPFIBP1Q86W92 1011 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 IGHDP01880 384 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 CHPF2Q9P2E5 772 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 GOLIM4O00461 696 aa19.37■□□□□ 0.69
SCAF8-201ENST00000367178 DHX8Q14562 1220 aaKnown RBP19.37■□□□□ 0.69
SCAF8-201ENST00000367178 CDC5LQ99459 802 aaKnown RBP19.37■□□□□ 0.69
SCAF8-201ENST00000367178 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
SCAF8-201ENST00000367178 MEIS3Q99687 375 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 LIMCH1Q9UPQ0 1083 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
SCAF8-201ENST00000367178 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
SCAF8-201ENST00000367178 SNRKQ9NRH2 765 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 IQCA1Q86XH1 822 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 BRPF3Q9ULD4 1205 aa19.36■□□□□ 0.69
SCAF8-201ENST00000367178 MPNDQ8N594 471 aa19.35■□□□□ 0.69
SCAF8-201ENST00000367178 CTCFLQ8NI51 663 aaPredicted RBP19.35■□□□□ 0.69
SCAF8-201ENST00000367178 RANBP6O60518 1105 aaKnown RBP19.35■□□□□ 0.69
SCAF8-201ENST00000367178 SYCP1Q15431 976 aa19.35■□□□□ 0.69
SCAF8-201ENST00000367178 HSP90B2PQ58FF3 399 aa19.35■□□□□ 0.69
SCAF8-201ENST00000367178 CEP131Q9UPN4 1083 aa19.35■□□□□ 0.69
SCAF8-201ENST00000367178 AKAP4Q5JQC9 854 aa19.35■□□□□ 0.69
SCAF8-201ENST00000367178 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
SCAF8-201ENST00000367178 RNF41Q9H4P4 317 aaPredicted RBP19.35■□□□□ 0.69
SCAF8-201ENST00000367178 ZNF76P36508 570 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 C8orf58Q8NAV2 365 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 XAGE3Q8WTP9 111 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 SLC39A6Q13433 755 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 C8orf76Q96K31 380 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 TANGO6Q9C0B7 1094 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 FLT4P35916 1363 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 TSHZ3Q63HK5 1081 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 RHPN1Q8TCX5 695 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 AK7Q96M32 723 aa19.34■□□□□ 0.69
SCAF8-201ENST00000367178 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
SCAF8-201ENST00000367178 CDR1P51861 262 aa19.33■□□□□ 0.69
SCAF8-201ENST00000367178 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.69
SCAF8-201ENST00000367178 COPS6Q7L5N1 327 aa19.33■□□□□ 0.69
SCAF8-201ENST00000367178 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.69
SCAF8-201ENST00000367178 ZNF771Q7L3S4 317 aaPredicted RBP19.33■□□□□ 0.69
SCAF8-201ENST00000367178 CBFA2T2O43439 604 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 TTC22Q5TAA0 569 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 SEC63Q9UGP8 760 aaKnown RBP19.33■□□□□ 0.68
SCAF8-201ENST00000367178 CCDC82Q8N4S0 544 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 TBC1D2Q9BYX2 928 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 C19orf44Q9H6X5 657 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 NPATQ14207 1427 aa19.33■□□□□ 0.68
SCAF8-201ENST00000367178 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
SCAF8-201ENST00000367178 TTF1Q15361 905 aaPredicted RBP19.32■□□□□ 0.68
SCAF8-201ENST00000367178 ZNF444Q8N0Y2 327 aaPredicted RBP19.32■□□□□ 0.68
SCAF8-201ENST00000367178 SLC12A7Q9Y666 1083 aa19.32■□□□□ 0.68
SCAF8-201ENST00000367178 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
SCAF8-201ENST00000367178 IFIT3O14879 490 aaKnown RBP19.32■□□□□ 0.68
SCAF8-201ENST00000367178 PLEKHH1Q9ULM0 1364 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 CARD14Q9BXL6 1004 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 DDX46Q7L014 1031 aaKnown RBP19.31■□□□□ 0.68
SCAF8-201ENST00000367178 LRRC59Q96AG4 307 aaKnown RBP19.31■□□□□ 0.68
SCAF8-201ENST00000367178 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 DEF6Q9H4E7 631 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 LUC7LQ9NQ29 371 aaKnown RBP19.31■□□□□ 0.68
SCAF8-201ENST00000367178 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
SCAF8-201ENST00000367178 SLF2Q8IX21 1173 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 SYCE3A1L190 88 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 KCNA6P17658 529 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
SCAF8-201ENST00000367178 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 PDCL3Q9H2J4 239 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms