RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
PACRG-203ENST00000366889 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
PACRG-203ENST00000366889 PARP4Q9UKK3 1724 aaKnown RBP11.17□□□□□ -0.62
PACRG-203ENST00000366889 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
PACRG-203ENST00000366889 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
PACRG-203ENST00000366889 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
PACRG-203ENST00000366889 CRB1P82279 1406 aa11.15□□□□□ -0.62
PACRG-203ENST00000366889 SUPT16HQ9Y5B9 1047 aaKnown RBP11.15□□□□□ -0.62
PACRG-203ENST00000366889 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
PACRG-203ENST00000366889 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
PACRG-203ENST00000366889 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
PACRG-203ENST00000366889 MTHFSDQ2M296 383 aaKnown RBP11.14□□□□□ -0.63
PACRG-203ENST00000366889 PTF1AQ7RTS3 328 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
PACRG-203ENST00000366889 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
PACRG-203ENST00000366889 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
PACRG-203ENST00000366889 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
PACRG-203ENST00000366889 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
PACRG-203ENST00000366889 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
PACRG-203ENST00000366889 MYH16Q9H6N6 1097 aa11.13□□□□□ -0.63
PACRG-203ENST00000366889 RCAN3Q9UKA8 241 aa11.13□□□□□ -0.63
PACRG-203ENST00000366889 WNK3Q9BYP7 1800 aa11.12□□□□□ -0.63
PACRG-203ENST00000366889 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
PACRG-203ENST00000366889 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
PACRG-203ENST00000366889 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
PACRG-203ENST00000366889 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
PACRG-203ENST00000366889 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
PACRG-203ENST00000366889 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
PACRG-203ENST00000366889 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
PACRG-203ENST00000366889 FANCIQ9NVI1 1328 aa11.1□□□□□ -0.63
PACRG-203ENST00000366889 HSPA6P17066 643 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 GNAI1P63096 354 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
PACRG-203ENST00000366889 GPR162Q16538 588 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
PACRG-203ENST00000366889 THRAP3Q9Y2W1 955 aaKnown RBP11.09□□□□□ -0.63
PACRG-203ENST00000366889 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 GNAT3A8MTJ3 354 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 NEFLP07196 543 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
PACRG-203ENST00000366889 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 ATP10DQ9P241 1426 aa11.09□□□□□ -0.63
PACRG-203ENST00000366889 OVOS2A0A0G2JMS6 1433 aa11.08□□□□□ -0.64
PACRG-203ENST00000366889 MCM10Q7L590 875 aa11.08□□□□□ -0.64
PACRG-203ENST00000366889 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
PACRG-203ENST00000366889 RTF1Q92541 710 aaKnown RBP11.08□□□□□ -0.64
PACRG-203ENST00000366889 TSR2Q969E8 191 aaKnown RBP11.08□□□□□ -0.64
PACRG-203ENST00000366889 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
PACRG-203ENST00000366889 PAPPAQ13219 1627 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 MEGF6O75095 1541 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 CHL1O00533 1208 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
PACRG-203ENST00000366889 RRP1P56182 461 aaKnown RBP11.07□□□□□ -0.64
PACRG-203ENST00000366889 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 ARXQ96QS3 562 aa11.07□□□□□ -0.64
PACRG-203ENST00000366889 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 PLSCR1O15162 318 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 IL2RBP14784 551 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
PACRG-203ENST00000366889 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
PACRG-203ENST00000366889 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 MBIPQ9NS73 344 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 COL24A1Q17RW2 1714 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
PACRG-203ENST00000366889 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
PACRG-203ENST00000366889 DDB1Q16531 1140 aa11.05□□□□□ -0.64
PACRG-203ENST00000366889 ERICH6BQ5W0A0 696 aa11.05□□□□□ -0.64
PACRG-203ENST00000366889 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
PACRG-203ENST00000366889 KAT6BQ8WYB5 2073 aa11.05□□□□□ -0.64
PACRG-203ENST00000366889 RARSP54136 660 aaKnown RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 COL13A1Q5TAT6 717 aaPredicted RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 MAMSTRQ6ZN01 415 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 C1orf141Q5JVX7 400 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 CDCA7Q9BWT1 371 aaPredicted RBP11.04□□□□□ -0.64
PACRG-203ENST00000366889 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
PACRG-203ENST00000366889 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 EXOC5O00471 708 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
PACRG-203ENST00000366889 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
PACRG-203ENST00000366889 NLGN2Q8NFZ4 835 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
PACRG-203ENST00000366889 VAMP4O75379 141 aa11.02□□□□□ -0.65
PACRG-203ENST00000366889 BCAR3O75815 825 aa11.02□□□□□ -0.65
PACRG-203ENST00000366889 SLC34A2O95436 690 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms