RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 POLRMTO00411 1230 aaKnown RBP13.94□□□□□ -0.18
PARP1-201ENST00000366790 STARD3NLO95772 234 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 DPEP1P16444 411 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 ZNF790Q6PG37 636 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
PARP1-201ENST00000366790 NRXN2Q9P2S2 1712 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
PARP1-201ENST00000366790 AFDNP55196 1824 aaKnown RBP13.93□□□□□ -0.18
PARP1-201ENST00000366790 FCHSD2O94868 740 aa13.93□□□□□ -0.18
PARP1-201ENST00000366790 KCNA3P22001 575 aa13.93□□□□□ -0.18
PARP1-201ENST00000366790 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
PARP1-201ENST00000366790 EIF5P55010 431 aaKnown RBP13.92□□□□□ -0.18
PARP1-201ENST00000366790 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
PARP1-201ENST00000366790 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
PARP1-201ENST00000366790 BCS1LQ9Y276 419 aa13.92□□□□□ -0.18
PARP1-201ENST00000366790 A0A087WZG4 1122 aa13.91□□□□□ -0.18
PARP1-201ENST00000366790 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
PARP1-201ENST00000366790 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
PARP1-201ENST00000366790 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
PARP1-201ENST00000366790 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
PARP1-201ENST00000366790 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
PARP1-201ENST00000366790 PIM2Q9P1W9 311 aa13.91□□□□□ -0.18
PARP1-201ENST00000366790 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
PARP1-201ENST00000366790 NFIXQ14938 502 aa13.9□□□□□ -0.18
PARP1-201ENST00000366790 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
PARP1-201ENST00000366790 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
PARP1-201ENST00000366790 DLEC1Q9Y238 1755 aa13.88□□□□□ -0.19
PARP1-201ENST00000366790 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
PARP1-201ENST00000366790 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
PARP1-201ENST00000366790 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
PARP1-201ENST00000366790 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
PARP1-201ENST00000366790 SERPINB2P05120 415 aa13.87□□□□□ -0.19
PARP1-201ENST00000366790 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
PARP1-201ENST00000366790 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
PARP1-201ENST00000366790 SBF1O95248 1867 aa13.87□□□□□ -0.19
PARP1-201ENST00000366790 CEP350Q5VT06 3117 aa13.86□□□□□ -0.19
PARP1-201ENST00000366790 CHRNA5P30532 468 aa13.86□□□□□ -0.19
PARP1-201ENST00000366790 KCNQ3O43525 872 aa13.85□□□□□ -0.19
PARP1-201ENST00000366790 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
PARP1-201ENST00000366790 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
PARP1-201ENST00000366790 BCORQ6W2J9 1755 aa13.85□□□□□ -0.19
PARP1-201ENST00000366790 KIF3CO14782 793 aa13.84□□□□□ -0.19
PARP1-201ENST00000366790 A1BGP04217 495 aa13.84□□□□□ -0.19
PARP1-201ENST00000366790 MCM10Q7L590 875 aa13.84□□□□□ -0.19
PARP1-201ENST00000366790 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
PARP1-201ENST00000366790 ANKRD31Q8N7Z5 1873 aa13.84□□□□□ -0.19
PARP1-201ENST00000366790 RGL2O15211 777 aa13.83□□□□□ -0.2
PARP1-201ENST00000366790 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
PARP1-201ENST00000366790 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
PARP1-201ENST00000366790 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
PARP1-201ENST00000366790 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
PARP1-201ENST00000366790 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
PARP1-201ENST00000366790 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.2
PARP1-201ENST00000366790 NEFMP07197 916 aa13.82□□□□□ -0.2
PARP1-201ENST00000366790 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
PARP1-201ENST00000366790 C9orf131Q5VYM1 1079 aa13.82□□□□□ -0.2
PARP1-201ENST00000366790 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
PARP1-201ENST00000366790 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
PARP1-201ENST00000366790 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
PARP1-201ENST00000366790 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 PNNQ9H307 717 aaKnown RBP13.81□□□□□ -0.2
PARP1-201ENST00000366790 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
PARP1-201ENST00000366790 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
PARP1-201ENST00000366790 H0YIN7 160 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 HSPA6P17066 643 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 PDE6BP35913 854 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 PRR5LQ6MZQ0 368 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 C2CD5Q86YS7 1000 aa13.8□□□□□ -0.2
PARP1-201ENST00000366790 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
PARP1-201ENST00000366790 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
PARP1-201ENST00000366790 PRAMEF22A3QJZ6 481 aa13.79□□□□□ -0.2
PARP1-201ENST00000366790 RALBP1Q15311 655 aa13.79□□□□□ -0.2
PARP1-201ENST00000366790 NFE2L2Q16236 605 aa13.79□□□□□ -0.2
PARP1-201ENST00000366790 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
PARP1-201ENST00000366790 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
PARP1-201ENST00000366790 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
PARP1-201ENST00000366790 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
PARP1-201ENST00000366790 TOMM70O94826 608 aa13.78□□□□□ -0.2
PARP1-201ENST00000366790 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 LMNB1P20700 586 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 FER1L6Q2WGJ9 1857 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
PARP1-201ENST00000366790 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 CNBD1Q8NA66 436 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 ARFGEF2Q9Y6D5 1785 aa13.77□□□□□ -0.21
PARP1-201ENST00000366790 TNRC6CQ9HCJ0 1690 aaKnown RBP13.76□□□□□ -0.21
PARP1-201ENST00000366790 NMRK2Q9NPI5 230 aa13.76□□□□□ -0.21
PARP1-201ENST00000366790 DICER1Q9UPY3 1922 aaKnown RBP13.76□□□□□ -0.21
PARP1-201ENST00000366790 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
PARP1-201ENST00000366790 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms