RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TERF1P54274 439 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 GSTTP1A0A1W2PQM5 241 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 BIN1O00499 593 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 TAF4BQ92750 862 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 HMOX1P09601 288 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 WDR63Q8IWG1 891 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 TRIM4Q9C037 500 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 ZNF76P36508 570 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 LIG3P49916 1009 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 RBBP5Q15291 538 aaKnown RBP12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 CAPZA3Q96KX2 299 aa12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 RRP15Q9Y3B9 282 aaKnown RBP12.77□□□□□ -0.37
CDC42BPA-205ENST00000366769 MACROD2A1Z1Q3 448 aa12.76□□□□□ -0.37
CDC42BPA-205ENST00000366769 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-205ENST00000366769 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-205ENST00000366769 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
CDC42BPA-205ENST00000366769 CEP128Q6ZU80 1094 aa12.76□□□□□ -0.37
CDC42BPA-205ENST00000366769 KIF6Q6ZMV9 814 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 WDR78Q5VTH9 848 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 PDE6BP35913 854 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 ANKS4BQ8N8V4 417 aa12.75□□□□□ -0.37
CDC42BPA-205ENST00000366769 HOOK3Q86VS8 718 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 GSDMDP57764 484 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 HSF2BPO75031 334 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 SPECC1LQ69YQ0 1117 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
CDC42BPA-205ENST00000366769 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 KIF5BP33176 963 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 ICE2Q659A1 982 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 HDXQ7Z353 690 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 CCDC150Q8NCX0 1101 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 CCDC6Q16204 474 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 TRIM68Q6AZZ1 485 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 USP5P45974 858 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 PPP2R3AQ06190 1150 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
CDC42BPA-205ENST00000366769 HMGB1P09429 215 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 ZNF853P0CG23 659 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 SPATS2LQ9NUQ6 558 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 PCK1P35558 622 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 KIF21BO75037 1637 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 ZWINTO95229 277 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 RIPOR2Q9Y4F9 1068 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 HLTFQ14527 1009 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■□□□ 13.6
CDC42BPA-205ENST00000366769 ATP2B3Q16720 1220 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 DBN1Q16643 649 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-205ENST00000366769 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 EVC2Q86UK5 1308 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 CETN2P41208 172 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms