RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 IDI1Q13907 227 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 ADCY5O95622 1261 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 SDSP20132 328 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 KIF24Q5T7B8 1368 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 OFD1O75665 1012 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
CDC42BPA-202ENST00000366764 CEP126Q9P2H0 1117 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 IQGAP3Q86VI3 1631 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 SETD1BQ9UPS6 1966 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 AOX1Q06278 1338 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 FAM200AQ8TCP9 573 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 PDE1AP54750 535 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 TMX3Q96JJ7 454 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
CDC42BPA-202ENST00000366764 TET3O43151 1660 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 EPS15P42566 896 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 FYB1O15117 783 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 USP25Q9UHP3 1055 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 USP8P40818 1118 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 MAP9Q49MG5 647 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 TRPM2O94759 1503 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 TTC41PQ6P2S7 1318 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 LAMC1P11047 1609 aa13.79□□□□□ -0.2
CDC42BPA-202ENST00000366764 STK3Q13188 491 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 CALCOCO1Q9P1Z2 691 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 TRAPPC8Q9Y2L5 1435 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 EPB41L2O43491 1005 aaKnown RBP13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 NUTM2GQ5VZR2 741 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 NME9Q86XW9 330 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 ESYT1Q9BSJ8 1104 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 RLBP1P12271 317 aa13.78□□□□□ -0.2
CDC42BPA-202ENST00000366764 CCDC69A6NI79 296 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 ZNF165P49910 485 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 VPS53Q5VIR6 699 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 NAP1L1P55209 391 aaKnown RBP13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 TUBB4BP68371 445 aa13.77□□□□□ -0.2
CDC42BPA-202ENST00000366764 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
CDC42BPA-202ENST00000366764 GOLGA6L10A6NI86 522 aa13.77□□□□□ -0.21
CDC42BPA-202ENST00000366764 G3V3G9 751 aa13.77□□□□□ -0.21
CDC42BPA-202ENST00000366764 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
CDC42BPA-202ENST00000366764 SIL1Q9H173 461 aa13.77□□□□□ -0.21
CDC42BPA-202ENST00000366764 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 PTPRTO14522 1441 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 NPATQ14207 1427 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 H0YHG0 523 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 ABCA8O94911 1581 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 MYOM2P54296 1465 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 PPIP5K1Q6PFW1 1433 aa13.76□□□□□ -0.21
CDC42BPA-202ENST00000366764 FAM107BQ9H098 131 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 A0A1W2PP64 1363 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 ZNF445P59923 1031 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 TNNT1P13805 278 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 PLEKHM2Q8IWE5 1019 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 ERLIN2O94905 339 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 GJB2P29033 226 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
CDC42BPA-202ENST00000366764 CABP4P57796 275 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
CDC42BPA-202ENST00000366764 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms