RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
MRPL55-209ENST00000366735 WDR90Q96KV7 1748 aa16.76■□□□□ 0.27
MRPL55-209ENST00000366735 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
MRPL55-209ENST00000366735 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
MRPL55-209ENST00000366735 KIF3CO14782 793 aa16.74■□□□□ 0.27
MRPL55-209ENST00000366735 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
MRPL55-209ENST00000366735 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
MRPL55-209ENST00000366735 SRP68Q9UHB9 627 aaKnown RBP16.74■□□□□ 0.27
MRPL55-209ENST00000366735 COL15A1P39059 1388 aa16.74■□□□□ 0.27
MRPL55-209ENST00000366735 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
MRPL55-209ENST00000366735 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
MRPL55-209ENST00000366735 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-209ENST00000366735 TOMM70O94826 608 aa16.72■□□□□ 0.27
MRPL55-209ENST00000366735 HMOX1P09601 288 aa16.72■□□□□ 0.27
MRPL55-209ENST00000366735 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
MRPL55-209ENST00000366735 C16orf71Q8IYS4 520 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-209ENST00000366735 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
MRPL55-209ENST00000366735 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
MRPL55-209ENST00000366735 APLP1P51693 650 aa16.71■□□□□ 0.27
MRPL55-209ENST00000366735 DDR1Q08345 913 aa16.71■□□□□ 0.27
MRPL55-209ENST00000366735 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
MRPL55-209ENST00000366735 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.27
MRPL55-209ENST00000366735 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
MRPL55-209ENST00000366735 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
MRPL55-209ENST00000366735 C9orf131Q5VYM1 1079 aa16.7■□□□□ 0.26
MRPL55-209ENST00000366735 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
MRPL55-209ENST00000366735 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
MRPL55-209ENST00000366735 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
MRPL55-209ENST00000366735 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-209ENST00000366735 KCNA3P22001 575 aa16.69■□□□□ 0.26
MRPL55-209ENST00000366735 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
MRPL55-209ENST00000366735 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
MRPL55-209ENST00000366735 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
MRPL55-209ENST00000366735 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
MRPL55-209ENST00000366735 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
MRPL55-209ENST00000366735 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-209ENST00000366735 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
MRPL55-209ENST00000366735 TM4SF1P30408 202 aa16.68■□□□□ 0.26
MRPL55-209ENST00000366735 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
MRPL55-209ENST00000366735 MTHFSDQ2M296 383 aaKnown RBP16.68■□□□□ 0.26
MRPL55-209ENST00000366735 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
MRPL55-209ENST00000366735 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
MRPL55-209ENST00000366735 ARFGEF2Q9Y6D5 1785 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 A0A087WZG4 1122 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 STARD3NLO95772 234 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 TEFQ10587 303 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
MRPL55-209ENST00000366735 CHRNA5P30532 468 aa16.66■□□□□ 0.26
MRPL55-209ENST00000366735 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
MRPL55-209ENST00000366735 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
MRPL55-209ENST00000366735 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
MRPL55-209ENST00000366735 PER1O15534 1290 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-209ENST00000366735 NFIXQ14938 502 aa16.65■□□□□ 0.26
MRPL55-209ENST00000366735 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
MRPL55-209ENST00000366735 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-209ENST00000366735 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-209ENST00000366735 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
MRPL55-209ENST00000366735 FER1L6Q2WGJ9 1857 aa16.64■□□□□ 0.25
MRPL55-209ENST00000366735 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-209ENST00000366735 SERPINB2P05120 415 aa16.63■□□□□ 0.25
MRPL55-209ENST00000366735 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
MRPL55-209ENST00000366735 FSTL1Q12841 308 aa16.63■□□□□ 0.25
MRPL55-209ENST00000366735 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
MRPL55-209ENST00000366735 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
MRPL55-209ENST00000366735 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
MRPL55-209ENST00000366735 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 H0YIN7 160 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
MRPL55-209ENST00000366735 LMNB1P20700 586 aa16.6■□□□□ 0.25
MRPL55-209ENST00000366735 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
MRPL55-209ENST00000366735 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
MRPL55-209ENST00000366735 NPHP1O15259 732 aa16.59■□□□□ 0.25
MRPL55-209ENST00000366735 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-209ENST00000366735 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-209ENST00000366735 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
MRPL55-209ENST00000366735 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
MRPL55-209ENST00000366735 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-209ENST00000366735 PDE6BP35913 854 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 RASSF7Q02833 373 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-209ENST00000366735 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 ZNF496Q96IT1 587 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-209ENST00000366735 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.24
MRPL55-209ENST00000366735 RRAGCQ9HB90 399 aa16.57■□□□□ 0.24
MRPL55-209ENST00000366735 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
MRPL55-209ENST00000366735 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
MRPL55-209ENST00000366735 ST5P78524 1137 aa16.56■□□□□ 0.24
MRPL55-209ENST00000366735 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
MRPL55-209ENST00000366735 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
MRPL55-209ENST00000366735 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
MRPL55-209ENST00000366735 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
MRPL55-209ENST00000366735 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
MRPL55-209ENST00000366735 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
MRPL55-209ENST00000366735 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms