RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 ZPR1O75312 459 aa31.4■■■□□ 2.62
SHC1-201ENST00000366442 NEFMP07197 916 aa31.4■■■□□ 2.62
SHC1-201ENST00000366442 FKBP8Q14318 412 aa31.4■■■□□ 2.62
SHC1-201ENST00000366442 TGFB2P61812 414 aa31.39■■■□□ 2.62
SHC1-201ENST00000366442 MCM10Q7L590 875 aa31.39■■■□□ 2.62
SHC1-201ENST00000366442 PLEKHF1Q96S99 279 aa31.38■■■□□ 2.61
SHC1-201ENST00000366442 PNNQ9H307 717 aaKnown RBP31.38■■■□□ 2.61
SHC1-201ENST00000366442 NARFQ9UHQ1 456 aa31.38■■■□□ 2.61
SHC1-201ENST00000366442 ZNF784Q8NCA9 323 aaPredicted RBP31.37■■■□□ 2.61
SHC1-201ENST00000366442 PXDNLA1KZ92 1463 aa31.36■■■□□ 2.61
SHC1-201ENST00000366442 USPL1Q5W0Q7 1092 aa31.36■■■□□ 2.61
SHC1-201ENST00000366442 KIAA1551Q9HCM1 1747 aa31.35■■■□□ 2.61
SHC1-201ENST00000366442 KCNQ3O43525 872 aa31.34■■■□□ 2.61
SHC1-201ENST00000366442 CANXP27824 592 aaKnown RBP31.34■■■□□ 2.61
SHC1-201ENST00000366442 TM4SF1P30408 202 aa31.34■■■□□ 2.61
SHC1-201ENST00000366442 EIF5P55010 431 aaKnown RBP31.34■■■□□ 2.61
SHC1-201ENST00000366442 DDR1Q08345 913 aa31.34■■■□□ 2.61
SHC1-201ENST00000366442 DCTN1Q14203 1278 aa31.33■■■□□ 2.61
SHC1-201ENST00000366442 A0A087WZG4 1122 aa31.32■■■□□ 2.6
SHC1-201ENST00000366442 MYBBP1AQ9BQG0 1328 aaKnown RBP31.31■■■□□ 2.6
SHC1-201ENST00000366442 POLRMTO00411 1230 aaKnown RBP31.31■■■□□ 2.6
SHC1-201ENST00000366442 DLG5Q8TDM6 1919 aa31.31■■■□□ 2.6
SHC1-201ENST00000366442 NFE2L2Q16236 605 aa31.3■■■□□ 2.6
SHC1-201ENST00000366442 N4BP2Q86UW6 1770 aaPredicted RBP31.3■■■□□ 2.6
SHC1-201ENST00000366442 IL6STP40189 918 aaPredicted RBP31.29■■■□□ 2.6
SHC1-201ENST00000366442 TAF7Q15545 349 aaPredicted RBP31.29■■■□□ 2.6
SHC1-201ENST00000366442 MAPK8IP3Q9UPT6 1336 aa31.28■■■□□ 2.6
SHC1-201ENST00000366442 BCL2L12Q9HB09 334 aa31.28■■■□□ 2.6
SHC1-201ENST00000366442 A0A0G2JLW4 131 aa31.27■■■□□ 2.6
SHC1-201ENST00000366442 WWC3Q9ULE0 1092 aa31.27■■■□□ 2.6
SHC1-201ENST00000366442 SNRPA1P09661 255 aaKnown RBP31.26■■■□□ 2.59
SHC1-201ENST00000366442 DPEP1P16444 411 aa31.26■■■□□ 2.59
SHC1-201ENST00000366442 NFIXQ14938 502 aa31.26■■■□□ 2.59
SHC1-201ENST00000366442 A1BGP04217 495 aa31.25■■■□□ 2.59
SHC1-201ENST00000366442 USP16Q9Y5T5 823 aa31.24■■■□□ 2.59
SHC1-201ENST00000366442 BRCA1P38398 1863 aaKnown RBP31.23■■■□□ 2.59
SHC1-201ENST00000366442 ZEB1P37275 1124 aaPredicted RBP31.23■■■□□ 2.59
SHC1-201ENST00000366442 PNISRQ8TF01 805 aaKnown RBP31.23■■■□□ 2.59
SHC1-201ENST00000366442 NRXN2Q9P2S2 1712 aa31.23■■■□□ 2.59
SHC1-201ENST00000366442 SCN7AQ01118 1682 aa31.22■■■□□ 2.59
SHC1-201ENST00000366442 NPM2Q86SE8 214 aaKnown RBP31.22■■■□□ 2.59
SHC1-201ENST00000366442 KCNA3P22001 575 aa31.21■■■□□ 2.59
SHC1-201ENST00000366442 AFDNP55196 1824 aaKnown RBP31.21■■■□□ 2.59
SHC1-201ENST00000366442 PRAMEF22A3QJZ6 481 aa31.2■■■□□ 2.59
SHC1-201ENST00000366442 BCS1LQ9Y276 419 aa31.2■■■□□ 2.59
SHC1-201ENST00000366442 ZNF330Q9Y3S2 320 aaPredicted RBP31.2■■■□□ 2.59
SHC1-201ENST00000366442 KDM3BQ7LBC6 1761 aa31.19■■■□□ 2.58
SHC1-201ENST00000366442 SERPINB2P05120 415 aa31.18■■■□□ 2.58
SHC1-201ENST00000366442 MIS18AQ9NYP9 233 aa31.18■■■□□ 2.58
SHC1-201ENST00000366442 TBC1D2BQ9UPU7 963 aa31.18■■■□□ 2.58
SHC1-201ENST00000366442 PRKRIP1Q9H875 184 aaPredicted RBP31.17■■■□□ 2.58
SHC1-201ENST00000366442 PIM2Q9P1W9 311 aa31.17■■■□□ 2.58
SHC1-201ENST00000366442 CAMTA2O94983 1202 aa31.15■■■□□ 2.58
SHC1-201ENST00000366442 THUMPD2Q9BTF0 503 aaKnown RBP31.15■■■□□ 2.58
SHC1-201ENST00000366442 ADCY9O60503 1353 aa31.15■■■□□ 2.58
SHC1-201ENST00000366442 RIPK4P57078 832 aa31.14■■■□□ 2.58
SHC1-201ENST00000366442 TBC1D9BQ66K14 1250 aa31.14■■■□□ 2.58
SHC1-201ENST00000366442 ARFGEF1Q9Y6D6 1849 aa31.14■■■□□ 2.58
SHC1-201ENST00000366442 LAMB4A4D0S4 1761 aa31.13■■■□□ 2.57
SHC1-201ENST00000366442 BCORQ6W2J9 1755 aa31.13■■■□□ 2.57
SHC1-201ENST00000366442 BICDL1Q6ZP65 573 aa31.13■■■□□ 2.57
SHC1-201ENST00000366442 DZIP3Q86Y13 1208 aaKnown RBP31.13■■■□□ 2.57
SHC1-201ENST00000366442 CHRNA5P30532 468 aa31.12■■■□□ 2.57
SHC1-201ENST00000366442 EIF4A1P60842 406 aaKnown RBP31.12■■■□□ 2.57
SHC1-201ENST00000366442 DALRD3Q5D0E6 543 aaKnown RBP31.12■■■□□ 2.57
SHC1-201ENST00000366442 CARMIL3Q8ND23 1372 aa31.12■■■□□ 2.57
SHC1-201ENST00000366442 GIGYF1O75420 1035 aaPredicted RBP31.11■■■□□ 2.57
SHC1-201ENST00000366442 TMPOP42166 694 aaKnown RBP31.11■■■□□ 2.57
SHC1-201ENST00000366442 PIP4K2AP48426 406 aaPredicted RBP31.11■■■□□ 2.57
SHC1-201ENST00000366442 LMOD3Q0VAK6 560 aa31.11■■■□□ 2.57
SHC1-201ENST00000366442 WDR43Q15061 677 aaKnown RBP eCLIP31.11■■■□□ 2.577e-6■■■■■ 27.3
SHC1-201ENST00000366442 ATP10DQ9P241 1426 aa31.11■■■□□ 2.57
SHC1-201ENST00000366442 NBPF26B4DH59 902 aa31.1■■■□□ 2.57
SHC1-201ENST00000366442 NBPF10Q6P3W6 841 aaKnown RBP31.1■■■□□ 2.57
SHC1-201ENST00000366442 NBPF15Q8N660 670 aa31.1■■■□□ 2.57
SHC1-201ENST00000366442 RGL2O15211 777 aa31.09■■■□□ 2.57
SHC1-201ENST00000366442 CLEC4GQ6UXB4 293 aa31.09■■■□□ 2.57
SHC1-201ENST00000366442 SETDB2Q96T68 719 aa31.08■■■□□ 2.57
SHC1-201ENST00000366442 BABAM1Q9NWV8 329 aa31.08■■■□□ 2.57
SHC1-201ENST00000366442 ARHGAP27Q6ZUM4 889 aa31.07■■■□□ 2.56
SHC1-201ENST00000366442 RUNDC1Q96C34 613 aa31.07■■■□□ 2.56
SHC1-201ENST00000366442 CCDC146Q8IYE0 955 aa31.06■■■□□ 2.56
SHC1-201ENST00000366442 ZNF652Q9Y2D9 606 aa31.06■■■□□ 2.56
SHC1-201ENST00000366442 DLEC1Q9Y238 1755 aa31.06■■■□□ 2.56
SHC1-201ENST00000366442 TSPYL4Q9UJ04 414 aa31.05■■■□□ 2.56
SHC1-201ENST00000366442 ADAMTS8Q9UP79 889 aa31.05■■■□□ 2.56
SHC1-201ENST00000366442 BRIP1Q9BX63 1249 aa31.04■■■□□ 2.56
SHC1-201ENST00000366442 PDZRN3Q9UPQ7 1066 aa31.04■■■□□ 2.56
SHC1-201ENST00000366442 PRR5LQ6MZQ0 368 aa31.03■■■□□ 2.56
SHC1-201ENST00000366442 H0YIN7 160 aa31.02■■■□□ 2.56
SHC1-201ENST00000366442 C2CD5Q86YS7 1000 aa31.02■■■□□ 2.56
SHC1-201ENST00000366442 CNBD1Q8NA66 436 aa31.01■■■□□ 2.55
SHC1-201ENST00000366442 RRP7AQ9Y3A4 280 aaKnown RBP31.01■■■□□ 2.55
SHC1-201ENST00000366442 ANKRD31Q8N7Z5 1873 aa31.01■■■□□ 2.55
SHC1-201ENST00000366442 PDE6BP35913 854 aa31■■■□□ 2.55
SHC1-201ENST00000366442 GPBP1L1Q9HC44 474 aaPredicted RBP31■■■□□ 2.55
SHC1-201ENST00000366442 C1QTNF8P60827 252 aa30.99■■■□□ 2.55
SHC1-201ENST00000366442 TTLL6Q8N841 843 aa30.99■■■□□ 2.55
SHC1-201ENST00000366442 ERBB4Q15303 1308 aa30.98■■■□□ 2.55
SHC1-201ENST00000366442 NEUROD2Q15784 382 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms