RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
SNORA55-201ENST00000364587 SOX10P56693 466 aa12.56□□□□□ -0.4
SNORA55-201ENST00000364587 GRM1Q13255 1194 aa12.56□□□□□ -0.4
SNORA55-201ENST00000364587 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
SNORA55-201ENST00000364587 H0YIN7 160 aa12.55□□□□□ -0.4
SNORA55-201ENST00000364587 CA12O43570 354 aa12.55□□□□□ -0.4
SNORA55-201ENST00000364587 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
SNORA55-201ENST00000364587 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
SNORA55-201ENST00000364587 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
SNORA55-201ENST00000364587 KDRP35968 1356 aa12.55□□□□□ -0.4
SNORA55-201ENST00000364587 C21orf2O43822 256 aa12.54□□□□□ -0.4
SNORA55-201ENST00000364587 MAP2K2P36507 400 aa12.54□□□□□ -0.4
SNORA55-201ENST00000364587 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
SNORA55-201ENST00000364587 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
SNORA55-201ENST00000364587 CASP8AP2Q9UKL3 1982 aa12.54□□□□□ -0.4
SNORA55-201ENST00000364587 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
SNORA55-201ENST00000364587 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
SNORA55-201ENST00000364587 ZPR1O75312 459 aa12.53□□□□□ -0.4
SNORA55-201ENST00000364587 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
SNORA55-201ENST00000364587 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
SNORA55-201ENST00000364587 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
SNORA55-201ENST00000364587 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
SNORA55-201ENST00000364587 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
SNORA55-201ENST00000364587 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.41
SNORA55-201ENST00000364587 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNORA55-201ENST00000364587 SCN4AP35499 1836 aa12.52□□□□□ -0.41
SNORA55-201ENST00000364587 MYH14Q7Z406 1995 aaKnown RBP12.51□□□□□ -0.41
SNORA55-201ENST00000364587 AOC2O75106 756 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 PHKG2P15735 406 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 EPHX2P34913 555 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNORA55-201ENST00000364587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNORA55-201ENST00000364587 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 INSRP06213 1382 aa12.51□□□□□ -0.41
SNORA55-201ENST00000364587 SERPINB2P05120 415 aa12.5□□□□□ -0.41
SNORA55-201ENST00000364587 NFIXQ14938 502 aa12.5□□□□□ -0.41
SNORA55-201ENST00000364587 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
SNORA55-201ENST00000364587 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
SNORA55-201ENST00000364587 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
SNORA55-201ENST00000364587 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
SNORA55-201ENST00000364587 HABP4Q5JVS0 413 aaKnown RBP12.48□□□□□ -0.41
SNORA55-201ENST00000364587 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
SNORA55-201ENST00000364587 ROCK2O75116 1388 aaKnown RBP12.47□□□□□ -0.41
SNORA55-201ENST00000364587 FER1L6Q2WGJ9 1857 aa12.47□□□□□ -0.41
SNORA55-201ENST00000364587 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
SNORA55-201ENST00000364587 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
SNORA55-201ENST00000364587 TLL2Q9Y6L7 1015 aa12.47□□□□□ -0.41
SNORA55-201ENST00000364587 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
SNORA55-201ENST00000364587 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
SNORA55-201ENST00000364587 LTBP1Q14766 1721 aa12.46□□□□□ -0.41
SNORA55-201ENST00000364587 BRPF1P55201 1214 aaPredicted RBP12.46□□□□□ -0.41
SNORA55-201ENST00000364587 FLT4P35916 1363 aa12.45□□□□□ -0.42
SNORA55-201ENST00000364587 PDE6BP35913 854 aa12.45□□□□□ -0.42
SNORA55-201ENST00000364587 CABP4P57796 275 aa12.45□□□□□ -0.42
SNORA55-201ENST00000364587 FMR1Q06787 632 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNORA55-201ENST00000364587 CST9Q5W186 159 aa12.45□□□□□ -0.42
SNORA55-201ENST00000364587 INTS5Q6P9B9 1019 aaKnown RBP12.45□□□□□ -0.42
SNORA55-201ENST00000364587 ADAMTSL1Q8N6G6 1762 aa12.45□□□□□ -0.42
SNORA55-201ENST00000364587 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
SNORA55-201ENST00000364587 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
SNORA55-201ENST00000364587 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
SNORA55-201ENST00000364587 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
SNORA55-201ENST00000364587 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
SNORA55-201ENST00000364587 KIF24Q5T7B8 1368 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 TONSLQ96HA7 1378 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 ZNF541Q9H0D2 1346 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 DLL1O00548 723 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 CIAPIN1Q6FI81 312 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
SNORA55-201ENST00000364587 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
SNORA55-201ENST00000364587 FYB1O15117 783 aa12.42□□□□□ -0.42
SNORA55-201ENST00000364587 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
SNORA55-201ENST00000364587 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
SNORA55-201ENST00000364587 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
SNORA55-201ENST00000364587 BRIP1Q9BX63 1249 aa12.42□□□□□ -0.42
SNORA55-201ENST00000364587 BICDL1Q6ZP65 573 aa12.41□□□□□ -0.42
SNORA55-201ENST00000364587 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
SNORA55-201ENST00000364587 EYA1Q99502 592 aa12.41□□□□□ -0.42
SNORA55-201ENST00000364587 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
SNORA55-201ENST00000364587 NCAPD2Q15021 1401 aa12.4□□□□□ -0.42
SNORA55-201ENST00000364587 TRAF5O00463 557 aa12.4□□□□□ -0.42
SNORA55-201ENST00000364587 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
SNORA55-201ENST00000364587 GPC2Q8N158 579 aa12.4□□□□□ -0.42
SNORA55-201ENST00000364587 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
SNORA55-201ENST00000364587 SOS1Q07889 1333 aaPredicted RBP12.39□□□□□ -0.43
SNORA55-201ENST00000364587 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
SNORA55-201ENST00000364587 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 FZD9O00144 591 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
SNORA55-201ENST00000364587 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
SNORA55-201ENST00000364587 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNORA55-201ENST00000364587 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 STYK1Q6J9G0 422 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
SNORA55-201ENST00000364587 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
SNORA55-201ENST00000364587 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNORA55-201ENST00000364587 NOGQ13253 232 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms