RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
COL6A1-201ENST00000361866 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-201ENST00000361866 BRPF1P55201 1214 aaPredicted RBP16.41■□□□□ 0.22
COL6A1-201ENST00000361866 ZNF445P59923 1031 aa16.41■□□□□ 0.22
COL6A1-201ENST00000361866 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
COL6A1-201ENST00000361866 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-201ENST00000361866 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 CHMLP26374 656 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 AK2P54819 239 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL6A1-201ENST00000361866 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
COL6A1-201ENST00000361866 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
COL6A1-201ENST00000361866 HS1BP3Q53T59 392 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 BIN1O00499 593 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
COL6A1-201ENST00000361866 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
COL6A1-201ENST00000361866 SYT1P21579 422 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
COL6A1-201ENST00000361866 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
COL6A1-201ENST00000361866 TPM1P09493 284 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 GPS2Q13227 327 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 MSH6P52701 1360 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 F13A1P00488 732 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
COL6A1-201ENST00000361866 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
COL6A1-201ENST00000361866 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 ANO6Q4KMQ2 910 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 ACEP12821 1306 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 CCDC66A2RUB6 948 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 PTGS1P23219 599 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
COL6A1-201ENST00000361866 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
COL6A1-201ENST00000361866 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 ASXL2Q76L83 1435 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
COL6A1-201ENST00000361866 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
COL6A1-201ENST00000361866 RRP12Q5JTH9 1297 aaKnown RBP16.37■□□□□ 0.21
COL6A1-201ENST00000361866 ANAPC15P60006 121 aa16.36■□□□□ 0.21
COL6A1-201ENST00000361866 LUZP1Q86V48 1076 aa16.36■□□□□ 0.21
COL6A1-201ENST00000361866 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
COL6A1-201ENST00000361866 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
COL6A1-201ENST00000361866 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
COL6A1-201ENST00000361866 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
COL6A1-201ENST00000361866 CEBPAP49715 358 aaPredicted RBP16.35■□□□□ 0.21
COL6A1-201ENST00000361866 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
COL6A1-201ENST00000361866 PCMTD1Q96MG8 357 aaPredicted RBP16.35■□□□□ 0.21
COL6A1-201ENST00000361866 TMX1Q9H3N1 280 aa16.35■□□□□ 0.21
COL6A1-201ENST00000361866 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 ZBTB9Q96C00 473 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL6A1-201ENST00000361866 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 UBXN4Q92575 508 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 PPP1R9BQ96SB3 815 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 RBM8AQ9Y5S9 174 aaKnown RBP16.34■□□□□ 0.21
COL6A1-201ENST00000361866 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
COL6A1-201ENST00000361866 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
COL6A1-201ENST00000361866 ATF3P18847 181 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
COL6A1-201ENST00000361866 KRT32Q14532 448 aa16.33■□□□□ 0.21
COL6A1-201ENST00000361866 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.21
COL6A1-201ENST00000361866 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.21
COL6A1-201ENST00000361866 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.21
COL6A1-201ENST00000361866 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
COL6A1-201ENST00000361866 FSIP1Q8NA03 581 aa16.33■□□□□ 0.2
COL6A1-201ENST00000361866 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.2
COL6A1-201ENST00000361866 IL13P35225 146 aa16.33■□□□□ 0.2
COL6A1-201ENST00000361866 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
COL6A1-201ENST00000361866 URI1O94763 535 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 PDE4CQ08493 712 aa16.32■□□□□ 0.2
COL6A1-201ENST00000361866 BRF1Q92994 677 aa16.32■□□□□ 0.2
COL6A1-201ENST00000361866 INTS4Q96HW7 963 aaKnown RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
COL6A1-201ENST00000361866 POLR3GO15318 223 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-201ENST00000361866 TYRO3Q06418 890 aa16.32■□□□□ 0.2
COL6A1-201ENST00000361866 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
COL6A1-201ENST00000361866 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
COL6A1-201ENST00000361866 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
COL6A1-201ENST00000361866 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
COL6A1-201ENST00000361866 MYD88Q99836 296 aa16.31■□□□□ 0.2
COL6A1-201ENST00000361866 GTF2E1P29083 439 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-201ENST00000361866 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
COL6A1-201ENST00000361866 IPO7O95373 1038 aaKnown RBP16.3■□□□□ 0.2
COL6A1-201ENST00000361866 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
COL6A1-201ENST00000361866 POGZQ7Z3K3 1410 aa16.3■□□□□ 0.2
COL6A1-201ENST00000361866 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
COL6A1-201ENST00000361866 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
COL6A1-201ENST00000361866 ERVK-7P63135 1459 aa16.3■□□□□ 0.2
COL6A1-201ENST00000361866 HSP90AA4PQ58FG1 418 aa16.3■□□□□ 0.2
COL6A1-201ENST00000361866 CEP135Q66GS9 1140 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms