RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SMC3Q9UQE7 1217 aa15.14■□□□□ 0.01
VAMP1-201ENST00000361716 FOSBP53539 338 aa15.14■□□□□ 0.01
VAMP1-201ENST00000361716 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
VAMP1-201ENST00000361716 SPTLC3Q9NUV7 552 aa15.14■□□□□ 0.01
VAMP1-201ENST00000361716 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
VAMP1-201ENST00000361716 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
VAMP1-201ENST00000361716 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 IL16Q14005 1332 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 CCDC192P0DO97 292 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 ANKRD7Q92527 254 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
VAMP1-201ENST00000361716 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
VAMP1-201ENST00000361716 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
VAMP1-201ENST00000361716 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
VAMP1-201ENST00000361716 ELF2Q15723 593 aa15.12■□□□□ 0.01
VAMP1-201ENST00000361716 ARHGAP31Q2M1Z3 1444 aa15.12■□□□□ 0.01
VAMP1-201ENST00000361716 GABPB1Q06547 395 aaPredicted RBP15.11■□□□□ 0.01
VAMP1-201ENST00000361716 TERF2Q15554 542 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 PDE1AP54750 535 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 CWC27Q6UX04 472 aaKnown RBP15.11■□□□□ 0.01
VAMP1-201ENST00000361716 ANKRD44Q8N8A2 993 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 SPG7Q9UQ90 795 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
VAMP1-201ENST00000361716 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
VAMP1-201ENST00000361716 AMPHP49418 695 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 UBE2HP62256 183 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 RPAP2Q8IXW5 612 aaPredicted RBP15.1■□□□□ 0.01
VAMP1-201ENST00000361716 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
VAMP1-201ENST00000361716 CALCOCO1Q9P1Z2 691 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 SMTNL1A8MU46 457 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 MCM2P49736 904 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
VAMP1-201ENST00000361716 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
VAMP1-201ENST00000361716 MYOM1P52179 1685 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
VAMP1-201ENST00000361716 STX6O43752 255 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 PPFIA3O75145 1194 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 GNAI2P04899 355 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 TPM3P06753 285 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
VAMP1-201ENST00000361716 CLIP2Q9UDT6 1046 aa15.09■□□□□ 0.01
VAMP1-201ENST00000361716 PREX1Q8TCU6 1659 aa15.08■□□□□ 0.01
VAMP1-201ENST00000361716 MSH6P52701 1360 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 TCEANC2Q96MN5 208 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 LRRFIP2Q9Y608 721 aaKnown RBP15.08■□□□□ 0
VAMP1-201ENST00000361716 SETBP1Q9Y6X0 1596 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 ANXA1P04083 346 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 ZSCAN22P10073 491 aaPredicted RBP15.08■□□□□ 0
VAMP1-201ENST00000361716 SYT1P21579 422 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
VAMP1-201ENST00000361716 AGLP35573 1532 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 CEBPZQ03701 1054 aaKnown RBP15.07■□□□□ 0
VAMP1-201ENST00000361716 PTPN14Q15678 1187 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 TNMDQ9H2S6 317 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 ARID5BQ14865 1188 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 KMT5BQ4FZB7 885 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 LMOD2Q6P5Q4 547 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 BICD2Q8TD16 824 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 ARHGAP45Q92619 1136 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
VAMP1-201ENST00000361716 ESYT1Q9BSJ8 1104 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 LTKP29376 864 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 NUP62CLQ9H1M0 184 aa15.07■□□□□ 0
VAMP1-201ENST00000361716 GOLGA6L19H0YKK7 550 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 STK3Q13188 491 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 NEK11Q8NG66 645 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 ATP6V1DQ9Y5K8 247 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
VAMP1-201ENST00000361716 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
VAMP1-201ENST00000361716 MAP3K11Q16584 847 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
VAMP1-201ENST00000361716 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ 0
VAMP1-201ENST00000361716 HAP1P54257 671 aaPredicted RBP15.05■□□□□ 0
VAMP1-201ENST00000361716 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ 0
VAMP1-201ENST00000361716 CTIFO43310 598 aaKnown RBP15.05■□□□□ -0
VAMP1-201ENST00000361716 ZNF397Q8NF99 534 aaPredicted RBP15.05■□□□□ -0
VAMP1-201ENST00000361716 NSD2O96028 1365 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ -0
VAMP1-201ENST00000361716 IL13P35225 146 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 FBXO38Q6PIJ6 1188 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 C10orf67Q8IYJ2 551 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 NECAB1Q8N987 351 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 DNAJC25Q9H1X3 360 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 ADGRB1O14514 1584 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 ABCC4O15439 1325 aa15.05■□□□□ -0
VAMP1-201ENST00000361716 HNRNPH2P55795 449 aaKnown RBP15.04■□□□□ -0
VAMP1-201ENST00000361716 TYRO3Q06418 890 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
VAMP1-201ENST00000361716 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 USP27XA6NNY8 438 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 F13A1P00488 732 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms