RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 C8orf34Q49A92 452 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 UNC5CLQ8IV45 518 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 LRP6O75581 1613 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 AFF2P51816 1311 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 FAM177BA6PVY3 158 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 ITPK1Q13572 414 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 CENPQQ7L2Z9 268 aaPredicted RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 TTC5Q8N0Z6 440 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 DBF4Q9UBU7 674 aaPredicted RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 USP21Q9UK80 565 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 RGPD8O14715 1765 aaPredicted RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 FMNL2Q96PY5 1086 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 MYD88Q99836 296 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 SRCIN1Q9C0H9 1055 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 ANKRD45Q5TZF3 282 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 CCDC24Q8N4L8 307 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 SUCLG2Q96I99 432 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 PCDH11XQ9BZA7 1347 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 PCDH11YQ9BZA8 1340 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 SNRPA1P09661 255 aaKnown RBP3.61□□□□□ -1.83
LTN1-201ENST00000361371 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 HLFQ16534 295 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 BACH2Q9BYV9 841 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 TMOD3Q9NYL9 352 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 CHGBP05060 677 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 ANKRD44Q8N8A2 993 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 GPTP24298 496 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 KSR2Q6VAB6 950 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 RWDD1Q9H446 243 aaPredicted RBP3.61□□□□□ -1.83
LTN1-201ENST00000361371 DISP2A7MBM2 1401 aa3.61□□□□□ -1.83
LTN1-201ENST00000361371 ANKRD13DQ6ZTN6 518 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 PPP1R42Q7Z4L9 355 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 FNBP4Q8N3X1 1017 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 HDAC1Q13547 482 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 JCADQ9P266 1359 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 TRPM3Q9HCF6 1732 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 SNAP23O00161 211 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 RIC3Q7Z5B4 369 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 NUTM1Q86Y26 1132 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 IL25Q9H293 177 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 SOS1Q07889 1333 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 ERVV-2B6SEH9 535 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 CYP19A1P11511 503 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 DCTPP1Q9H773 170 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 BABAM1Q9NWV8 329 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 RGS17Q9UGC6 210 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 WTIPA6NIX2 430 aaPredicted RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 SEPT12Q8IYM1 358 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 SIL1Q9H173 461 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 NDUFB9Q9Y6M9 179 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 MARF1Q9Y4F3 1742 aaKnown RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 GSPT1P15170 499 aaKnown RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 UBE3BQ7Z3V4 1068 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 FAM89AQ96GI7 184 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 QTRT2Q9H974 415 aaKnown RBP3.6□□□□□ -1.83
LTN1-201ENST00000361371 SLIT2O94813 1529 aa3.6□□□□□ -1.83
LTN1-201ENST00000361371 GCKRQ14397 625 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 POTEAQ6S8J7 498 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 GJD4Q96KN9 370 aaPredicted RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 SRCAPQ6ZRS2 3230 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 SRGAP3O43295 1099 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 SURF6O75683 361 aaKnown RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 HOXB7P09629 217 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 ATP8B2P98198 1209 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 LINS1Q8NG48 757 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 PUS3Q9BZE2 481 aaKnown RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 AKAP12Q02952 1782 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 PTPRCP08575 1304 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 DTNBO60941 627 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 UBTFL1P0CB47 393 aaPredicted RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 CASP7P55210 303 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 VPS72Q15906 364 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 CHD1LQ86WJ1 897 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 ZNF594Q96JF6 807 aaPredicted RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 TLR7Q9NYK1 1049 aaKnown RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 NEURL1BA8MQ27 555 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 SASH1O94885 1247 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 MAP4K4O95819 1239 aaPredicted RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 EDC3Q96F86 508 aaKnown RBP3.59□□□□□ -1.83
LTN1-201ENST00000361371 LRRC4BQ9NT99 713 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 RGPD1P0DJD0 1748 aa3.59□□□□□ -1.83
LTN1-201ENST00000361371 A0A087WZG4 1122 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 LOC102724428A0A0B4J2F2 783 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 SIK1P57059 783 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 NUCB1Q02818 461 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 LMBR1LQ6UX01 489 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 RPAP2Q8IXW5 612 aaPredicted RBP3.59□□□□□ -1.84
LTN1-201ENST00000361371 SRP68Q9UHB9 627 aaKnown RBP3.59□□□□□ -1.84
LTN1-201ENST00000361371 HSP90AB1P08238 724 aaKnown RBP3.59□□□□□ -1.84
LTN1-201ENST00000361371 SLFNL1Q499Z3 407 aa3.59□□□□□ -1.84
LTN1-201ENST00000361371 MEX3CQ5U5Q3 659 aaKnown RBP3.59□□□□□ -1.84
LTN1-201ENST00000361371 CCT4P50991 539 aaKnown RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 C3orf67Q6ZVT6 689 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 PLEKHM2Q8IWE5 1019 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 PROM2Q8N271 834 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 BCL9O00512 1426 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 GNAI2P04899 355 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 EIF5P55010 431 aaKnown RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 COL9A3Q14050 684 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 INTS5Q6P9B9 1019 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms