RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 ZNF445P59923 1031 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
SMC5-201ENST00000361138 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
SMC5-201ENST00000361138 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
SMC5-201ENST00000361138 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■■■■■ 35.6
SMC5-201ENST00000361138 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 SHTN1A0MZ66 631 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 FEZ1Q99689 392 aa16.29■□□□□ 0.2
SMC5-201ENST00000361138 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 TESK2Q96S53 571 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 CTNNA3Q9UI47 895 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 F13A1P00488 732 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
SMC5-201ENST00000361138 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 MCM3P25205 808 aa16.28■□□□□ 0.2
SMC5-201ENST00000361138 ZNF397Q8NF99 534 aaPredicted RBP16.28■□□□□ 0.2
SMC5-201ENST00000361138 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
SMC5-201ENST00000361138 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
SMC5-201ENST00000361138 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
SMC5-201ENST00000361138 MYRIPQ8NFW9 859 aa16.27■□□□□ 0.19
SMC5-201ENST00000361138 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
SMC5-201ENST00000361138 STIM1Q13586 685 aa16.27■□□□□ 0.19
SMC5-201ENST00000361138 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.19
SMC5-201ENST00000361138 ABTB2Q8N961 1025 aa16.27■□□□□ 0.19
SMC5-201ENST00000361138 SLC52A1Q9NWF4 448 aa16.27■□□□□ 0.19
SMC5-201ENST00000361138 SKILP12757 684 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 LMAN1P49257 510 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 PDE1AP54750 535 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
SMC5-201ENST00000361138 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 FYB1O15117 783 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 PZPP20742 1482 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 GOLGA6L9A6NEM1 432 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 KIAA1328Q86T90 577 aa16.26■□□□□ 0.19
SMC5-201ENST00000361138 FAM107BQ9H098 131 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 PTGS1P23219 599 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 GIMAP7Q8NHV1 300 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 NOS1P29475 1434 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
SMC5-201ENST00000361138 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 DNMT1P26358 1616 aaKnown RBP16.24■□□□□ 0.19
SMC5-201ENST00000361138 ERLIN2O94905 339 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 INTS4Q96HW7 963 aaKnown RBP16.24■□□□□ 0.19
SMC5-201ENST00000361138 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
SMC5-201ENST00000361138 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
SMC5-201ENST00000361138 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 WASF1Q92558 559 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 DNM1Q05193 864 aaKnown RBP16.24■□□□□ 0.19
SMC5-201ENST00000361138 GCC2Q8IWJ2 1684 aa16.24■□□□□ 0.19
SMC5-201ENST00000361138 CEP131Q9UPN4 1083 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
SMC5-201ENST00000361138 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
SMC5-201ENST00000361138 TYRO3Q06418 890 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 CENPHQ9H3R5 247 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
SMC5-201ENST00000361138 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 ZSCAN25Q6NSZ9 544 aa16.23■□□□□ 0.19
SMC5-201ENST00000361138 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMC5-201ENST00000361138 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
SMC5-201ENST00000361138 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 KIF20AO95235 890 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 ODF2Q5BJF6 829 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 MYL6BP14649 208 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 FLIIQ13045 1269 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 DNAJC25Q9H1X3 360 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 IGSF3O75054 1194 aa16.22■□□□□ 0.19
SMC5-201ENST00000361138 NME9Q86XW9 330 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 MEIS3Q99687 375 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 DACT1Q9NYF0 836 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 BIN1O00499 593 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 ZNF530Q6P9A1 599 aaPredicted RBP16.21■□□□□ 0.19
SMC5-201ENST00000361138 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 NUDT16Q96DE0 195 aaKnown RBP16.21■□□□□ 0.19
SMC5-201ENST00000361138 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMC5-201ENST00000361138 V9GYY5 206 aaPredicted RBP16.21■□□□□ 0.19
SMC5-201ENST00000361138 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms