RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 DIAPH3Q9NSV4 1193 aa5.5□□□□□ -1.53
PTPN22-201ENST00000359785 KIF2AO00139 706 aaPredicted RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 MSNP26038 577 aaKnown RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 TBC1D9Q6ZT07 1266 aa5.5□□□□□ -1.53
PTPN22-201ENST00000359785 RPAP2Q8IXW5 612 aaPredicted RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 ANKRD44Q8N8A2 993 aa5.5□□□□□ -1.53
PTPN22-201ENST00000359785 TM6SF1Q9BZW5 370 aa5.5□□□□□ -1.53
PTPN22-201ENST00000359785 GEMIN8Q9NWZ8 242 aaKnown RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 H2AFXP16104 143 aaPredicted RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
PTPN22-201ENST00000359785 TRIM44Q96DX7 344 aaPredicted RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 NAP1L5Q96NT1 182 aaPredicted RBP5.5□□□□□ -1.53
PTPN22-201ENST00000359785 PLEKHG1Q9ULL1 1385 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
PTPN22-201ENST00000359785 APAF1O14727 1248 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 GSPT1P15170 499 aaKnown RBP5.49□□□□□ -1.53
PTPN22-201ENST00000359785 HNRNPMP52272 730 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPN22-201ENST00000359785 MAPK8IP2Q13387 824 aaPredicted RBP5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TSGA10IPQ3SY00 556 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 PLEKHM2Q8IWE5 1019 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TTC14Q96N46 770 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 MAST2Q6P0Q8 1798 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TUBB4BP68371 445 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 SIRT2Q8IXJ6 389 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TDRD7Q8NHU6 1098 aaKnown RBP5.49□□□□□ -1.53
PTPN22-201ENST00000359785 GAS2L2Q8NHY3 880 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 SHANK3Q9BYB0 1731 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 COL18A1P39060 1754 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 NID2Q14112 1375 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TCP11L2Q8N4U5 519 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 RGPD5Q99666 1765 aa5.49□□□□□ -1.53
PTPN22-201ENST00000359785 TMPOP42166 694 aaKnown RBP5.48□□□□□ -1.53
PTPN22-201ENST00000359785 CCDC183Q5T5S1 534 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 BRMS1Q9HCU9 246 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 ATG3Q9NT62 314 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 TMEM63CQ9P1W3 806 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 CD2BP2O95400 341 aaKnown RBP5.48□□□□□ -1.53
PTPN22-201ENST00000359785 ATL3Q6DD88 541 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 FCHSD1Q86WN1 690 aa5.48□□□□□ -1.53
PTPN22-201ENST00000359785 DNAJC2Q99543 621 aaKnown RBP5.48□□□□□ -1.53
PTPN22-201ENST00000359785 CYP2C19P33261 490 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 CEP120Q8N960 986 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 SRCIN1Q9C0H9 1055 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 V9GYY5 206 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 MINK1Q8N4C8 1332 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 HTATSF1O43719 755 aaKnown RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 ZRANB2O95218 330 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 IQSEC3Q9UPP2 1182 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 MYH2Q9UKX2 1941 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 TULP1O00294 542 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 MX1P20591 662 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 TAF7LQ5H9L4 462 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 RUBCNQ92622 972 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 CFAP53Q96M91 514 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 PAGR1Q9BTK6 254 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 API5Q9BZZ5 524 aaKnown RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 TSPY26PQ9H489 355 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 A1CFQ9NQ94 594 aaKnown RBP5.47□□□□□ -1.53
PTPN22-201ENST00000359785 ZNF609O15014 1411 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 ADCY9O60503 1353 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 HEG1Q9ULI3 1381 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 EVC2Q86UK5 1308 aa5.47□□□□□ -1.53
PTPN22-201ENST00000359785 CCDC66A2RUB6 948 aa5.46□□□□□ -1.53
PTPN22-201ENST00000359785 KDM4AO75164 1064 aa5.46□□□□□ -1.53
PTPN22-201ENST00000359785 NCBP1Q09161 790 aaKnown RBP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 CNGB1Q14028 1251 aaPredicted RBP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 NOLC1Q14978 699 aaKnown RBP eCLIP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 TERF2Q15554 542 aa5.46□□□□□ -1.53
PTPN22-201ENST00000359785 SWT1Q5T5J6 900 aaKnown RBP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 NPM2Q86SE8 214 aaKnown RBP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 PANK1Q8TE04 598 aa5.46□□□□□ -1.53
PTPN22-201ENST00000359785 MRFAP1L1Q96HT8 127 aa5.46□□□□□ -1.53
PTPN22-201ENST00000359785 ATP1B4Q9UN42 357 aaPredicted RBP5.46□□□□□ -1.53
PTPN22-201ENST00000359785 VAMP4O75379 141 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 UBE2HP62256 183 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 KIF18AQ8NI77 898 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 OSBPL5Q9H0X9 879 aaPredicted RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 BCL2L12Q9HB09 334 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 RGPD3A6NKT7 1758 aaPredicted RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 RGPD4Q7Z3J3 1758 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 FAM237AA0A1B0GTK4 181 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 SRRM3A6NNA2 597 aaPredicted RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 FECHP22830 423 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 PRIM1P49642 420 aaKnown RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 LMOD3Q0VAK6 560 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 TEX2Q8IWB9 1127 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 SUGP1Q8IWZ8 645 aaKnown RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 SSH1Q8WYL5 1049 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 KCNF1Q9H3M0 494 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 DNAJC5Q9H3Z4 198 aa5.46□□□□□ -1.54
PTPN22-201ENST00000359785 RTN4Q9NQC3 1192 aaKnown RBP5.46□□□□□ -1.54
PTPN22-201ENST00000359785 SSFA2P28290 1259 aa5.45□□□□□ -1.54
PTPN22-201ENST00000359785 SLC4A3P48751 1232 aa5.45□□□□□ -1.54
PTPN22-201ENST00000359785 IMPACTQ9P2X3 320 aa5.45□□□□□ -1.54
PTPN22-201ENST00000359785 COG6Q9Y2V7 657 aa5.45□□□□□ -1.54
PTPN22-201ENST00000359785 WDR33Q9C0J8 1336 aaKnown RBP5.45□□□□□ -1.54
PTPN22-201ENST00000359785 ZNF397Q8NF99 534 aaPredicted RBP5.45□□□□□ -1.54
PTPN22-201ENST00000359785 CALCOCO1Q9P1Z2 691 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms