RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 MYRIPQ8NFW9 859 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 PHF14O94880 888 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
RPE-202ENST00000359429 FAM177BA6PVY3 158 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 CPA1P15085 419 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 MLECQ14165 292 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 CCDC183Q5T5S1 534 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 TTC14Q96N46 770 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 SNX14Q9Y5W7 946 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 AP5Z1O43299 807 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 AK2P54819 239 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 UVSSAQ2YD98 709 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
RPE-202ENST00000359429 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
RPE-202ENST00000359429 SYT1P21579 422 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
RPE-202ENST00000359429 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 AKAP12Q02952 1782 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 LARGE1O95461 756 aa13.12□□□□□ -0.31
RPE-202ENST00000359429 SGSM2O43147 1006 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 FIBPO43427 364 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 EYA1Q99502 592 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
RPE-202ENST00000359429 RAD50Q92878 1312 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 STX6O43752 255 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 MTERF4Q7Z6M4 381 aaKnown RBP13.11□□□□□ -0.31
RPE-202ENST00000359429 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
RPE-202ENST00000359429 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
RPE-202ENST00000359429 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 KDM4AO75164 1064 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
RPE-202ENST00000359429 UBE2HP62256 183 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
RPE-202ENST00000359429 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 TECPR2O15040 1411 aa13.1□□□□□ -0.31
RPE-202ENST00000359429 F13A1P00488 732 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
RPE-202ENST00000359429 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 USP6P35125 1406 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 TCHHQ07283 1943 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 AOX1Q06278 1338 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
RPE-202ENST00000359429 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
RPE-202ENST00000359429 ITSN1Q15811 1721 aa13.08□□□□□ -0.31
RPE-202ENST00000359429 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 DNM1Q05193 864 aaKnown RBP13.08□□□□□ -0.32
RPE-202ENST00000359429 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
RPE-202ENST00000359429 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
RPE-202ENST00000359429 KCNF1Q9H3M0 494 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 SPTLC3Q9NUV7 552 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 KDRP35968 1356 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
RPE-202ENST00000359429 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPE-202ENST00000359429 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
RPE-202ENST00000359429 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
RPE-202ENST00000359429 XRN1Q8IZH2 1706 aaKnown RBP13.07□□□□□ -0.32
RPE-202ENST00000359429 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
RPE-202ENST00000359429 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
RPE-202ENST00000359429 ST3GAL1Q11201 340 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 POLA2Q14181 598 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
RPE-202ENST00000359429 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
RPE-202ENST00000359429 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
RPE-202ENST00000359429 LETM1O95202 739 aaPredicted RBP13.06□□□□□ -0.32
RPE-202ENST00000359429 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
RPE-202ENST00000359429 GJB2P29033 226 aa13.06□□□□□ -0.32
RPE-202ENST00000359429 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
RPE-202ENST00000359429 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
RPE-202ENST00000359429 PTH1RQ03431 593 aa13.06□□□□□ -0.32
RPE-202ENST00000359429 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
RPE-202ENST00000359429 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
RPE-202ENST00000359429 SPC24Q8NBT2 197 aa13.05□□□□□ -0.32
RPE-202ENST00000359429 FLT4P35916 1363 aa13.05□□□□□ -0.32
RPE-202ENST00000359429 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
RPE-202ENST00000359429 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
RPE-202ENST00000359429 AMPHP49418 695 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms