RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 OTUD7AQ8TE49 926 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-202ENST00000358966 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
GGPS1-202ENST00000358966 C5P01031 1676 aa15.78■□□□□ 0.12
GGPS1-202ENST00000358966 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-202ENST00000358966 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
GGPS1-202ENST00000358966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■□□□□ 8.4
GGPS1-202ENST00000358966 CACNA1FO60840 1977 aa15.77■□□□□ 0.12
GGPS1-202ENST00000358966 CARD10Q9BWT7 1032 aa15.77■□□□□ 0.12
GGPS1-202ENST00000358966 LRRFIP2Q9Y608 721 aaKnown RBP15.77■□□□□ 0.12
GGPS1-202ENST00000358966 ADCY9O60503 1353 aa15.77■□□□□ 0.12
GGPS1-202ENST00000358966 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
GGPS1-202ENST00000358966 ABCC6O95255 1503 aa15.77■□□□□ 0.11
GGPS1-202ENST00000358966 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.11
GGPS1-202ENST00000358966 USP44Q9H0E7 712 aa15.77■□□□□ 0.11
GGPS1-202ENST00000358966 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
GGPS1-202ENST00000358966 CHMP4BQ9H444 224 aaKnown RBP15.76■□□□□ 0.11
GGPS1-202ENST00000358966 PTCD1O75127 700 aaKnown RBP15.76■□□□□ 0.11
GGPS1-202ENST00000358966 CWF19L2Q2TBE0 894 aaKnown RBP15.76■□□□□ 0.11
GGPS1-202ENST00000358966 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
GGPS1-202ENST00000358966 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
GGPS1-202ENST00000358966 EXOC6BQ9Y2D4 811 aa15.76■□□□□ 0.11
GGPS1-202ENST00000358966 SLC4A3P48751 1232 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 PDIA6Q15084 440 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 DNAAF4Q8WXU2 420 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 EP400Q96L91 3159 aa15.75■□□□□ 0.11
GGPS1-202ENST00000358966 HOXB7P09629 217 aa15.74■□□□□ 0.11
GGPS1-202ENST00000358966 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
GGPS1-202ENST00000358966 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
GGPS1-202ENST00000358966 DCTPP1Q9H773 170 aa15.74■□□□□ 0.11
GGPS1-202ENST00000358966 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
GGPS1-202ENST00000358966 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
GGPS1-202ENST00000358966 GNAI2P04899 355 aa15.74■□□□□ 0.11
GGPS1-202ENST00000358966 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
GGPS1-202ENST00000358966 BEND3Q5T5X7 828 aa15.73■□□□□ 0.11
GGPS1-202ENST00000358966 SRCIN1Q9C0H9 1055 aa15.73■□□□□ 0.11
GGPS1-202ENST00000358966 COL16A1Q07092 1604 aaPredicted RBP15.73■□□□□ 0.11
GGPS1-202ENST00000358966 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
GGPS1-202ENST00000358966 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
GGPS1-202ENST00000358966 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
GGPS1-202ENST00000358966 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
GGPS1-202ENST00000358966 AHDC1Q5TGY3 1603 aaPredicted RBP15.71■□□□□ 0.11
GGPS1-202ENST00000358966 PHLPP1O60346 1717 aa15.71■□□□□ 0.11
GGPS1-202ENST00000358966 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.11
GGPS1-202ENST00000358966 MRC1P22897 1456 aa15.7■□□□□ 0.1
GGPS1-202ENST00000358966 A0A0G2JS52 829 aa15.7■□□□□ 0.1
GGPS1-202ENST00000358966 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
GGPS1-202ENST00000358966 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
GGPS1-202ENST00000358966 DDX21Q9NR30 783 aaKnown RBP eCLIP15.7■□□□□ 0.1
GGPS1-202ENST00000358966 UBAP1LF5GYI3 381 aa15.7■□□□□ 0.1
GGPS1-202ENST00000358966 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
GGPS1-202ENST00000358966 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
GGPS1-202ENST00000358966 TOGARAM1Q9Y4F4 1720 aa15.69■□□□□ 0.1
GGPS1-202ENST00000358966 GNAI3P08754 354 aa15.69■□□□□ 0.1
GGPS1-202ENST00000358966 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
GGPS1-202ENST00000358966 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
GGPS1-202ENST00000358966 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
GGPS1-202ENST00000358966 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
GGPS1-202ENST00000358966 GLI3P10071 1580 aa15.68■□□□□ 0.1
GGPS1-202ENST00000358966 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
GGPS1-202ENST00000358966 PLEKHM2Q8IWE5 1019 aa15.68■□□□□ 0.1
GGPS1-202ENST00000358966 A1BGP04217 495 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 PPP1R42Q7Z4L9 355 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
GGPS1-202ENST00000358966 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 LRP10Q7Z4F1 713 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 NBPF10Q6P3W6 841 aaKnown RBP15.67■□□□□ 0.1
GGPS1-202ENST00000358966 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
GGPS1-202ENST00000358966 CCDC9Q9Y3X0 531 aaKnown RBP15.67■□□□□ 0.1
GGPS1-202ENST00000358966 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
GGPS1-202ENST00000358966 C9orf78Q9NZ63 289 aaPredicted RBP15.66■□□□□ 0.1
GGPS1-202ENST00000358966 N4BP2Q86UW6 1770 aaPredicted RBP15.66■□□□□ 0.1
GGPS1-202ENST00000358966 SRGAP3O43295 1099 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 TOM1O60784 492 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 HMMRO75330 724 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 PIGBQ92521 554 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 MYD88Q99836 296 aa15.66■□□□□ 0.1
GGPS1-202ENST00000358966 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
GGPS1-202ENST00000358966 ATP8B2P98198 1209 aa15.65■□□□□ 0.1
GGPS1-202ENST00000358966 TMOD3Q9NYL9 352 aa15.65■□□□□ 0.1
GGPS1-202ENST00000358966 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
GGPS1-202ENST00000358966 ERVV-2B6SEH9 535 aa15.64■□□□□ 0.09
GGPS1-202ENST00000358966 TTLL7Q6ZT98 887 aa15.64■□□□□ 0.09
GGPS1-202ENST00000358966 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.09
GGPS1-202ENST00000358966 COL22A1Q8NFW1 1626 aaPredicted RBP15.64■□□□□ 0.09
GGPS1-202ENST00000358966 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
GGPS1-202ENST00000358966 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
GGPS1-202ENST00000358966 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
GGPS1-202ENST00000358966 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
GGPS1-202ENST00000358966 RRAGDQ9NQL2 400 aaPredicted RBP15.63■□□□□ 0.09
GGPS1-202ENST00000358966 DISP2A7MBM2 1401 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms