RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
LINC01560-201ENST00000357412 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
LINC01560-201ENST00000357412 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
LINC01560-201ENST00000357412 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
LINC01560-201ENST00000357412 ZNF831Q5JPB2 1677 aa13.75□□□□□ -0.21
LINC01560-201ENST00000357412 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 STARD3NLO95772 234 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 HSPA6P17066 643 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 TEFQ10587 303 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 C9orf131Q5VYM1 1079 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
LINC01560-201ENST00000357412 SERPINB2P05120 415 aa13.73□□□□□ -0.21
LINC01560-201ENST00000357412 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
LINC01560-201ENST00000357412 CHD4Q14839 1912 aa13.72□□□□□ -0.21
LINC01560-201ENST00000357412 CEMIPQ8WUJ3 1361 aa13.72□□□□□ -0.21
LINC01560-201ENST00000357412 KCNQ3O43525 872 aa13.72□□□□□ -0.21
LINC01560-201ENST00000357412 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
LINC01560-201ENST00000357412 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
LINC01560-201ENST00000357412 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
LINC01560-201ENST00000357412 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.21
LINC01560-201ENST00000357412 A0A087WZG4 1122 aa13.71□□□□□ -0.21
LINC01560-201ENST00000357412 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
LINC01560-201ENST00000357412 NUDCQ9Y266 331 aa13.71□□□□□ -0.21
LINC01560-201ENST00000357412 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
LINC01560-201ENST00000357412 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
LINC01560-201ENST00000357412 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
LINC01560-201ENST00000357412 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
LINC01560-201ENST00000357412 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC01560-201ENST00000357412 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
LINC01560-201ENST00000357412 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
LINC01560-201ENST00000357412 TOMM70O94826 608 aa13.69□□□□□ -0.22
LINC01560-201ENST00000357412 A1BGP04217 495 aa13.69□□□□□ -0.22
LINC01560-201ENST00000357412 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
LINC01560-201ENST00000357412 RNF181Q9P0P0 153 aa13.69□□□□□ -0.22
LINC01560-201ENST00000357412 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
LINC01560-201ENST00000357412 COL5A3P25940 1745 aaPredicted RBP13.69□□□□□ -0.22
LINC01560-201ENST00000357412 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
LINC01560-201ENST00000357412 CARMIL3Q8ND23 1372 aa13.68□□□□□ -0.22
LINC01560-201ENST00000357412 TJP1Q07157 1748 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 RASSF7Q02833 373 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 MCM10Q7L590 875 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
LINC01560-201ENST00000357412 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
LINC01560-201ENST00000357412 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 PRELPP51888 382 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
LINC01560-201ENST00000357412 H0YIN7 160 aa13.65□□□□□ -0.22
LINC01560-201ENST00000357412 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
LINC01560-201ENST00000357412 RTF1Q92541 710 aaKnown RBP13.65□□□□□ -0.22
LINC01560-201ENST00000357412 BRIP1Q9BX63 1249 aa13.65□□□□□ -0.22
LINC01560-201ENST00000357412 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
LINC01560-201ENST00000357412 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
LINC01560-201ENST00000357412 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
LINC01560-201ENST00000357412 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
LINC01560-201ENST00000357412 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
LINC01560-201ENST00000357412 KIF13BQ9NQT8 1826 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 NFKBIEO00221 500 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 LMNB1P20700 586 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 PDE6BP35913 854 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 APLP1P51693 650 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
LINC01560-201ENST00000357412 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
LINC01560-201ENST00000357412 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
LINC01560-201ENST00000357412 ZNF622Q969S3 477 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC01560-201ENST00000357412 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
LINC01560-201ENST00000357412 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
LINC01560-201ENST00000357412 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
LINC01560-201ENST00000357412 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
LINC01560-201ENST00000357412 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
LINC01560-201ENST00000357412 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
LINC01560-201ENST00000357412 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
LINC01560-201ENST00000357412 DNAJC5GQ8N7S2 189 aa13.61□□□□□ -0.23
LINC01560-201ENST00000357412 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
LINC01560-201ENST00000357412 C21orf2O43822 256 aa13.6□□□□□ -0.23
LINC01560-201ENST00000357412 FSTL1Q12841 308 aa13.6□□□□□ -0.23
LINC01560-201ENST00000357412 C16orf71Q8IYS4 520 aaPredicted RBP13.6□□□□□ -0.23
LINC01560-201ENST00000357412 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
LINC01560-201ENST00000357412 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
LINC01560-201ENST00000357412 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
LINC01560-201ENST00000357412 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
LINC01560-201ENST00000357412 SRGNP10124 158 aa13.59□□□□□ -0.23
LINC01560-201ENST00000357412 RGL2O15211 777 aa13.58□□□□□ -0.24
LINC01560-201ENST00000357412 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
LINC01560-201ENST00000357412 ST5P78524 1137 aa13.58□□□□□ -0.24
LINC01560-201ENST00000357412 STYK1Q6J9G0 422 aa13.58□□□□□ -0.24
LINC01560-201ENST00000357412 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
LINC01560-201ENST00000357412 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
LINC01560-201ENST00000357412 NPHP1O15259 732 aa13.57□□□□□ -0.24
LINC01560-201ENST00000357412 HTRA3P83110 453 aa13.57□□□□□ -0.24
LINC01560-201ENST00000357412 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms