RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 RNMTO43148 476 aaKnown RBP30.54■■■□□ 2.48
HDGF-201ENST00000357325 RRAGDQ9NQL2 400 aaPredicted RBP30.54■■■□□ 2.48
HDGF-201ENST00000357325 PLEKHO1Q53GL0 409 aaPredicted RBP30.53■■■□□ 2.48
HDGF-201ENST00000357325 CLEC17AQ6ZS10 378 aa30.53■■■□□ 2.48
HDGF-201ENST00000357325 ZDHHC9Q9Y397 364 aa30.53■■■□□ 2.48
HDGF-201ENST00000357325 MCTP1Q6DN14 999 aa30.52■■■□□ 2.48
HDGF-201ENST00000357325 NOL8Q76FK4 1167 aaKnown RBP30.52■■■□□ 2.48
HDGF-201ENST00000357325 RHPN1Q8TCX5 695 aa30.52■■■□□ 2.48
HDGF-201ENST00000357325 FAM43AQ8N2R8 423 aa30.51■■■□□ 2.48
HDGF-201ENST00000357325 LMO7Q8WWI1 1683 aa30.51■■■□□ 2.47
HDGF-201ENST00000357325 MRE11P49959 708 aa30.5■■■□□ 2.47
HDGF-201ENST00000357325 ZNF142P52746 1687 aaPredicted RBP30.49■■■□□ 2.47
HDGF-201ENST00000357325 PI4K2BQ8TCG2 481 aa30.49■■■□□ 2.47
HDGF-201ENST00000357325 NPHP4O75161 1426 aaPredicted RBP30.48■■■□□ 2.47
HDGF-201ENST00000357325 FOXD4L5Q5VV16 416 aaPredicted RBP30.48■■■□□ 2.47
HDGF-201ENST00000357325 FOXD4L4Q8WXT5 416 aaPredicted RBP30.48■■■□□ 2.47
HDGF-201ENST00000357325 C1orf141Q5JVX7 400 aa30.48■■■□□ 2.47
HDGF-201ENST00000357325 TMX3Q96JJ7 454 aa30.48■■■□□ 2.47
HDGF-201ENST00000357325 HOXB7P09629 217 aa30.47■■■□□ 2.47
HDGF-201ENST00000357325 SKOR2Q2VWA4 1001 aaPredicted RBP30.47■■■□□ 2.47
HDGF-201ENST00000357325 NUCB2P80303 420 aa30.47■■■□□ 2.47
HDGF-201ENST00000357325 GIGYF1O75420 1035 aaPredicted RBP30.46■■■□□ 2.47
HDGF-201ENST00000357325 UPF3BQ9BZI7 483 aaKnown RBP30.46■■■□□ 2.47
HDGF-201ENST00000357325 MAP3K2Q9Y2U5 619 aa30.46■■■□□ 2.47
HDGF-201ENST00000357325 DDX49Q9Y6V7 483 aaKnown RBP30.46■■■□□ 2.47
HDGF-201ENST00000357325 ZC3H6P61129 1189 aaKnown RBP30.46■■■□□ 2.47
HDGF-201ENST00000357325 CWF19L2Q2TBE0 894 aaKnown RBP30.46■■■□□ 2.47
HDGF-201ENST00000357325 PHRF1Q9P1Y6 1649 aaKnown RBP30.45■■■□□ 2.47
HDGF-201ENST00000357325 ANO8Q9HCE9 1232 aaPredicted RBP30.45■■■□□ 2.47
HDGF-201ENST00000357325 AMOTQ4VCS5 1084 aa30.44■■■□□ 2.46
HDGF-201ENST00000357325 KRT28Q7Z3Y7 464 aa30.44■■■□□ 2.46
HDGF-201ENST00000357325 DDX17Q92841 729 aaKnown RBP30.44■■■□□ 2.46
HDGF-201ENST00000357325 RAB11FIP3O75154 756 aa30.43■■■□□ 2.46
HDGF-201ENST00000357325 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.43■■■□□ 2.46
HDGF-201ENST00000357325 DBF4Q9UBU7 674 aaPredicted RBP30.43■■■□□ 2.46
HDGF-201ENST00000357325 SLIT3O75094 1523 aa30.43■■■□□ 2.46
HDGF-201ENST00000357325 GOLGA6L22H0YM25 854 aa30.43■■■□□ 2.46
HDGF-201ENST00000357325 CWC22Q9HCG8 908 aaKnown RBP30.43■■■□□ 2.46
HDGF-201ENST00000357325 LMBRD1Q9NUN5 540 aa30.43■■■□□ 2.46
HDGF-201ENST00000357325 PA2G4Q9UQ80 394 aaKnown RBP30.42■■■□□ 2.46
HDGF-201ENST00000357325 KIF1BPQ96EK5 621 aa30.41■■■□□ 2.46
HDGF-201ENST00000357325 NCAPD2Q15021 1401 aa30.41■■■□□ 2.46
HDGF-201ENST00000357325 KLHL40Q2TBA0 621 aa30.41■■■□□ 2.46
HDGF-201ENST00000357325 RGPD5Q99666 1765 aa30.41■■■□□ 2.46
HDGF-201ENST00000357325 AOX1Q06278 1338 aa30.4■■■□□ 2.46
HDGF-201ENST00000357325 SLC39A6Q13433 755 aa30.4■■■□□ 2.46
HDGF-201ENST00000357325 PROSER2Q86WR7 435 aaPredicted RBP30.4■■■□□ 2.46
HDGF-201ENST00000357325 AIMP1Q12904 312 aaKnown RBP30.39■■■□□ 2.45
HDGF-201ENST00000357325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.39■■■□□ 2.45
HDGF-201ENST00000357325 HEG1Q9ULI3 1381 aa30.38■■■□□ 2.45
HDGF-201ENST00000357325 NCLP19338 710 aaKnown RBP30.38■■■□□ 2.45
HDGF-201ENST00000357325 PRPF40AO75400 957 aaKnown RBP30.37■■■□□ 2.45
HDGF-201ENST00000357325 PTMSP20962 102 aa30.37■■■□□ 2.45
HDGF-201ENST00000357325 MCCP23508 829 aa30.37■■■□□ 2.45
HDGF-201ENST00000357325 C9orf78Q9NZ63 289 aaPredicted RBP30.37■■■□□ 2.45
HDGF-201ENST00000357325 ADAMTSL3P82987 1691 aa30.37■■■□□ 2.45
HDGF-201ENST00000357325 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
HDGF-201ENST00000357325 OS9Q13438 667 aaPredicted RBP30.36■■■□□ 2.45
HDGF-201ENST00000357325 CAVIN1Q6NZI2 390 aaKnown RBP30.36■■■□□ 2.45
HDGF-201ENST00000357325 KSR2Q6VAB6 950 aa30.36■■■□□ 2.45
HDGF-201ENST00000357325 ERBB3P21860 1342 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 ANAPC15P60006 121 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 SGSM2O43147 1006 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 HSPA4P34932 840 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 CWC27Q6UX04 472 aaKnown RBP30.34■■■□□ 2.45
HDGF-201ENST00000357325 GPT2Q8TD30 523 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 KAZALD1Q96I82 304 aa30.34■■■□□ 2.45
HDGF-201ENST00000357325 CUL4AQ13619 759 aa30.33■■■□□ 2.45
HDGF-201ENST00000357325 PDIA6Q15084 440 aa30.33■■■□□ 2.45
HDGF-201ENST00000357325 RBM27Q9P2N5 1060 aaKnown RBP30.33■■■□□ 2.45
HDGF-201ENST00000357325 NSFL1CQ9UNZ2 370 aaKnown RBP30.33■■■□□ 2.45
HDGF-201ENST00000357325 C1orf167Q5SNV9 1468 aa30.33■■■□□ 2.45
HDGF-201ENST00000357325 LARP6Q9BRS8 491 aaKnown RBP30.33■■■□□ 2.45
HDGF-201ENST00000357325 SPG7Q9UQ90 795 aa30.33■■■□□ 2.45
HDGF-201ENST00000357325 ISY1Q9ULR0 285 aaKnown RBP30.32■■■□□ 2.44
HDGF-201ENST00000357325 RASEFQ8IZ41 740 aa30.32■■■□□ 2.44
HDGF-201ENST00000357325 SUCLG2Q96I99 432 aa30.32■■■□□ 2.44
HDGF-201ENST00000357325 MTX1Q13505 466 aa30.31■■■□□ 2.44
HDGF-201ENST00000357325 CABLES1Q8TDN4 633 aa30.3■■■□□ 2.44
HDGF-201ENST00000357325 LSG1Q9H089 658 aaKnown RBP30.3■■■□□ 2.44
HDGF-201ENST00000357325 NLRP2Q9NX02 1062 aa30.3■■■□□ 2.44
HDGF-201ENST00000357325 PIP4K2AP48426 406 aaPredicted RBP30.29■■■□□ 2.44
HDGF-201ENST00000357325 CNTROBQ8N137 903 aa30.29■■■□□ 2.44
HDGF-201ENST00000357325 SIPA1L3O60292 1781 aaPredicted RBP30.29■■■□□ 2.44
HDGF-201ENST00000357325 CAMTA1Q9Y6Y1 1673 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 ALDH1L1O75891 902 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 MYL6BP14649 208 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 FOXD4L6Q3SYB3 417 aaPredicted RBP30.28■■■□□ 2.44
HDGF-201ENST00000357325 FOXD4L3Q6VB84 417 aaPredicted RBP30.28■■■□□ 2.44
HDGF-201ENST00000357325 IL17RAQ96F46 866 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 SNX14Q9Y5W7 946 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 RAD50Q92878 1312 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 ZSCAN23Q3MJ62 389 aa30.28■■■□□ 2.44
HDGF-201ENST00000357325 DTNBO60941 627 aa30.27■■■□□ 2.44
HDGF-201ENST00000357325 CPA1P15085 419 aa30.27■■■□□ 2.44
HDGF-201ENST00000357325 MCM2P49736 904 aa30.27■■■□□ 2.44
HDGF-201ENST00000357325 NFATC2IPQ8NCF5 419 aa30.27■■■□□ 2.44
HDGF-201ENST00000357325 BICC1Q9H694 974 aaKnown RBP30.27■■■□□ 2.44
HDGF-201ENST00000357325 CHMP4AQ9BY43 222 aa30.27■■■□□ 2.44
HDGF-201ENST00000357325 BRD1O95696 1058 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms