RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 SASS6Q6UVJ0 657 aa16.53■□□□□ 0.24
CDKL1-202ENST00000356146 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
CDKL1-202ENST00000356146 TTC14Q96N46 770 aa16.53■□□□□ 0.24
CDKL1-202ENST00000356146 USP42Q9H9J4 1324 aaKnown RBP16.53■□□□□ 0.24
CDKL1-202ENST00000356146 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
CDKL1-202ENST00000356146 SGSM2O43147 1006 aa16.53■□□□□ 0.24
CDKL1-202ENST00000356146 MARF1Q9Y4F3 1742 aaKnown RBP16.52■□□□□ 0.24
CDKL1-202ENST00000356146 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
CDKL1-202ENST00000356146 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
CDKL1-202ENST00000356146 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
CDKL1-202ENST00000356146 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
CDKL1-202ENST00000356146 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.23
CDKL1-202ENST00000356146 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.23
CDKL1-202ENST00000356146 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.23
CDKL1-202ENST00000356146 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
CDKL1-202ENST00000356146 UQCRHLA0A096LP55 91 aa16.51■□□□□ 0.23
CDKL1-202ENST00000356146 UQCRHP07919 91 aa16.51■□□□□ 0.23
CDKL1-202ENST00000356146 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
CDKL1-202ENST00000356146 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
CDKL1-202ENST00000356146 IL25Q9H293 177 aa16.5■□□□□ 0.23
CDKL1-202ENST00000356146 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
CDKL1-202ENST00000356146 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
CDKL1-202ENST00000356146 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
CDKL1-202ENST00000356146 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
CDKL1-202ENST00000356146 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
CDKL1-202ENST00000356146 AMPHP49418 695 aa16.5■□□□□ 0.23
CDKL1-202ENST00000356146 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
CDKL1-202ENST00000356146 ESF1Q9H501 851 aaKnown RBP16.5■□□□□ 0.23
CDKL1-202ENST00000356146 ANKARQ7Z5J8 1434 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 HOXB7P09629 217 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 UBE2HP62256 183 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 MLECQ14165 292 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
CDKL1-202ENST00000356146 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
CDKL1-202ENST00000356146 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 ZMYND15Q9H091 742 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDKL1-202ENST00000356146 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 TCHHQ07283 1943 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 CEMIPQ8WUJ3 1361 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 SLIT1O75093 1534 aa16.48■□□□□ 0.23
CDKL1-202ENST00000356146 KCNB2Q92953 911 aa16.47■□□□□ 0.23
CDKL1-202ENST00000356146 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
CDKL1-202ENST00000356146 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
CDKL1-202ENST00000356146 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
CDKL1-202ENST00000356146 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
CDKL1-202ENST00000356146 ARHGAP23Q9P227 1491 aa16.47■□□□□ 0.23
CDKL1-202ENST00000356146 STX6O43752 255 aa16.46■□□□□ 0.23
CDKL1-202ENST00000356146 PTMAP06454 111 aaKnown RBP16.46■□□□□ 0.23
CDKL1-202ENST00000356146 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.23
CDKL1-202ENST00000356146 HOXC9P31274 260 aa16.46■□□□□ 0.23
CDKL1-202ENST00000356146 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
CDKL1-202ENST00000356146 PRIMPOLQ96LW4 560 aa16.46■□□□□ 0.23
CDKL1-202ENST00000356146 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
CDKL1-202ENST00000356146 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
CDKL1-202ENST00000356146 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
CDKL1-202ENST00000356146 F13A1P00488 732 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
CDKL1-202ENST00000356146 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 RGPD8O14715 1765 aaPredicted RBP16.45■□□□□ 0.22
CDKL1-202ENST00000356146 LTKP29376 864 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 AK2P54819 239 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 MTX1Q13505 466 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
CDKL1-202ENST00000356146 SYT1P21579 422 aa16.44■□□□□ 0.22
CDKL1-202ENST00000356146 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
CDKL1-202ENST00000356146 SPTLC3Q9NUV7 552 aa16.44■□□□□ 0.22
CDKL1-202ENST00000356146 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
CDKL1-202ENST00000356146 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
CDKL1-202ENST00000356146 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
CDKL1-202ENST00000356146 CNPY2Q9Y2B0 182 aa16.44■□□□□ 0.22
CDKL1-202ENST00000356146 TBX22Q9Y458 520 aa16.44■□□□□ 0.22
CDKL1-202ENST00000356146 SOX12O15370 315 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDKL1-202ENST00000356146 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
CDKL1-202ENST00000356146 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
CDKL1-202ENST00000356146 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
CDKL1-202ENST00000356146 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
CDKL1-202ENST00000356146 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
CDKL1-202ENST00000356146 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
CDKL1-202ENST00000356146 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
CDKL1-202ENST00000356146 RBM10P98175 930 aaKnown RBP16.42■□□□□ 0.22
CDKL1-202ENST00000356146 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
CDKL1-202ENST00000356146 KDM4AO75164 1064 aa16.41■□□□□ 0.22
CDKL1-202ENST00000356146 ADCY5O95622 1261 aa16.41■□□□□ 0.22
CDKL1-202ENST00000356146 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms