RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
PDLIM7-201ENST00000355572 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 NLGN1Q8N2Q7 840 aa22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 ZNF784Q8NCA9 323 aaPredicted RBP22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 BCL2L12Q9HB09 334 aa22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 COL15A1P39059 1388 aa22.37■■□□□ 1.17
PDLIM7-201ENST00000355572 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
PDLIM7-201ENST00000355572 USPL1Q5W0Q7 1092 aa22.35■■□□□ 1.17
PDLIM7-201ENST00000355572 VSIG10Q8N0Z9 540 aa22.35■■□□□ 1.17
PDLIM7-201ENST00000355572 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
PDLIM7-201ENST00000355572 CANXP27824 592 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-201ENST00000355572 TTC5Q8N0Z6 440 aa22.33■■□□□ 1.17
PDLIM7-201ENST00000355572 BTBD11A6QL63 1104 aa22.32■■□□□ 1.16
PDLIM7-201ENST00000355572 TM4SF1P30408 202 aa22.32■■□□□ 1.16
PDLIM7-201ENST00000355572 LAMB4A4D0S4 1761 aa22.32■■□□□ 1.16
PDLIM7-201ENST00000355572 ANKRD31Q8N7Z5 1873 aa22.32■■□□□ 1.16
PDLIM7-201ENST00000355572 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
PDLIM7-201ENST00000355572 A0A0G2JLW4 131 aa22.31■■□□□ 1.16
PDLIM7-201ENST00000355572 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-201ENST00000355572 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-201ENST00000355572 A1BGP04217 495 aa22.3■■□□□ 1.16
PDLIM7-201ENST00000355572 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-201ENST00000355572 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
PDLIM7-201ENST00000355572 USP16Q9Y5T5 823 aa22.3■■□□□ 1.16
PDLIM7-201ENST00000355572 DPEP1P16444 411 aa22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 KCNA3P22001 575 aa22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 PARP3Q9Y6F1 533 aa22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 DLEC1Q9Y238 1755 aa22.29■■□□□ 1.16
PDLIM7-201ENST00000355572 NFIXQ14938 502 aa22.28■■□□□ 1.16
PDLIM7-201ENST00000355572 RALBP1Q15311 655 aa22.27■■□□□ 1.16
PDLIM7-201ENST00000355572 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
PDLIM7-201ENST00000355572 CARMIL3Q8ND23 1372 aa22.26■■□□□ 1.15
PDLIM7-201ENST00000355572 GRIN3BO60391 1043 aa22.26■■□□□ 1.15
PDLIM7-201ENST00000355572 ZPR1O75312 459 aa22.25■■□□□ 1.15
PDLIM7-201ENST00000355572 RTF1Q92541 710 aaKnown RBP22.25■■□□□ 1.15
PDLIM7-201ENST00000355572 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
PDLIM7-201ENST00000355572 HTATSF1O43719 755 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 STARD3NLO95772 234 aa22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 TGFB2P61812 414 aa22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 NFE2L2Q16236 605 aa22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 TBC1D2BQ9UPU7 963 aa22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 ADCY9O60503 1353 aa22.24■■□□□ 1.15
PDLIM7-201ENST00000355572 CHRNA5P30532 468 aa22.23■■□□□ 1.15
PDLIM7-201ENST00000355572 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-201ENST00000355572 NBPF26B4DH59 902 aa22.22■■□□□ 1.15
PDLIM7-201ENST00000355572 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
PDLIM7-201ENST00000355572 NBPF10Q6P3W6 841 aaKnown RBP22.22■■□□□ 1.15
PDLIM7-201ENST00000355572 NBPF15Q8N660 670 aa22.22■■□□□ 1.15
PDLIM7-201ENST00000355572 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
PDLIM7-201ENST00000355572 TAF7Q15545 349 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-201ENST00000355572 BICDL1Q6ZP65 573 aa22.21■■□□□ 1.15
PDLIM7-201ENST00000355572 BCS1LQ9Y276 419 aa22.21■■□□□ 1.15
PDLIM7-201ENST00000355572 SBF1O95248 1867 aa22.21■■□□□ 1.15
PDLIM7-201ENST00000355572 IL6STP40189 918 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-201ENST00000355572 TEX13AQ9BXU3 409 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-201ENST00000355572 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
PDLIM7-201ENST00000355572 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
PDLIM7-201ENST00000355572 SERPINB2P05120 415 aa22.19■■□□□ 1.14
PDLIM7-201ENST00000355572 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
PDLIM7-201ENST00000355572 CCDC24Q8N4L8 307 aa22.18■■□□□ 1.14
PDLIM7-201ENST00000355572 SNRPA1P09661 255 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-201ENST00000355572 PRKRIP1Q9H875 184 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-201ENST00000355572 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-201ENST00000355572 CCDC88AQ3V6T2 1871 aa22.17■■□□□ 1.14
PDLIM7-201ENST00000355572 NUP98P52948 1817 aa22.17■■□□□ 1.14
PDLIM7-201ENST00000355572 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
PDLIM7-201ENST00000355572 EIF4A1P60842 406 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-201ENST00000355572 A0A087WZG4 1122 aa22.14■■□□□ 1.13
PDLIM7-201ENST00000355572 TMPOP42166 694 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-201ENST00000355572 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-201ENST00000355572 RIPK4P57078 832 aa22.13■■□□□ 1.13
PDLIM7-201ENST00000355572 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
PDLIM7-201ENST00000355572 NEFMP07197 916 aa22.12■■□□□ 1.13
PDLIM7-201ENST00000355572 PRR5LQ6MZQ0 368 aa22.12■■□□□ 1.13
PDLIM7-201ENST00000355572 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
PDLIM7-201ENST00000355572 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
PDLIM7-201ENST00000355572 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
PDLIM7-201ENST00000355572 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-201ENST00000355572 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
PDLIM7-201ENST00000355572 ARFGEF2Q9Y6D5 1785 aa22.1■■□□□ 1.13
PDLIM7-201ENST00000355572 ARHGAP27Q6ZUM4 889 aa22.1■■□□□ 1.13
PDLIM7-201ENST00000355572 ZNF526Q8TF50 670 aaPredicted RBP22.1■■□□□ 1.13
PDLIM7-201ENST00000355572 HLFQ16534 295 aa22.09■■□□□ 1.13
PDLIM7-201ENST00000355572 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
PDLIM7-201ENST00000355572 PRELPP51888 382 aa22.08■■□□□ 1.13
PDLIM7-201ENST00000355572 NEUROD2Q15784 382 aa22.08■■□□□ 1.13
PDLIM7-201ENST00000355572 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-201ENST00000355572 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
PDLIM7-201ENST00000355572 PNISRQ8TF01 805 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-201ENST00000355572 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-201ENST00000355572 KRT24Q2M2I5 525 aa22.06■■□□□ 1.12
PDLIM7-201ENST00000355572 TTLL7Q6ZT98 887 aa22.06■■□□□ 1.12
PDLIM7-201ENST00000355572 C2CD5Q86YS7 1000 aa22.06■■□□□ 1.12
PDLIM7-201ENST00000355572 NGEFQ8N5V2 710 aa22.06■■□□□ 1.12
PDLIM7-201ENST00000355572 C1QTNF8P60827 252 aa22.05■■□□□ 1.12
PDLIM7-201ENST00000355572 RASSF7Q02833 373 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms