RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 NCAPD2Q15021 1401 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 USP19O94966 1318 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 PSEN1P49768 467 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 AXDND1Q5T1B0 1012 aaPredicted RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 ATF7IPQ6VMQ6 1270 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 EVI5LQ96CN4 794 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 TMEM51Q9NW97 253 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 THRAP3Q9Y2W1 955 aaKnown RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 COL24A1Q17RW2 1714 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 NUP188Q5SRE5 1749 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 CACNA1FO60840 1977 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
COMMD9-202ENST00000355500 BABAM1Q9NWV8 329 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 MARCH6O60337 910 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
COMMD9-202ENST00000355500 BARGINQ6ZT62 677 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
COMMD9-202ENST00000355500 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
COMMD9-202ENST00000355500 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
COMMD9-202ENST00000355500 OVOS2A0A0G2JMS6 1433 aa10.11□□□□□ -0.79
COMMD9-202ENST00000355500 IGSF1Q8N6C5 1336 aa10.11□□□□□ -0.79
COMMD9-202ENST00000355500 NME8Q8N427 588 aa10.11□□□□□ -0.79
COMMD9-202ENST00000355500 SPATA31A5Q5VU36 1347 aa10.11□□□□□ -0.79
COMMD9-202ENST00000355500 SPATA31A7Q8IWB4 1347 aa10.11□□□□□ -0.79
COMMD9-202ENST00000355500 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
COMMD9-202ENST00000355500 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 NOP58Q9Y2X3 529 aaKnown RBP10.1□□□□□ -0.79
COMMD9-202ENST00000355500 CRB1P82279 1406 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 SMC4Q9NTJ3 1288 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 ADAMTS7Q9UKP4 1686 aa10.1□□□□□ -0.79
COMMD9-202ENST00000355500 ABCC4O15439 1325 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 FOXO3O43524 673 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 SSH1Q8WYL5 1049 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 C8orf34Q49A92 452 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 NBPF11Q86T75 865 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 PANK1Q8TE04 598 aa10.09□□□□□ -0.79
COMMD9-202ENST00000355500 TTC36A6NLP5 189 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 TRIM27P14373 513 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 TSHZ1Q6ZSZ6 1077 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 RLBP1P12271 317 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 EGFL6Q8IUX8 553 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
COMMD9-202ENST00000355500 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
COMMD9-202ENST00000355500 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 KDM3BQ7LBC6 1761 aa10.08□□□□□ -0.8
COMMD9-202ENST00000355500 IRF6O14896 467 aa10.07□□□□□ -0.8
COMMD9-202ENST00000355500 TPD52L2O43399 206 aaKnown RBP10.07□□□□□ -0.8
COMMD9-202ENST00000355500 VAMP4O75379 141 aa10.07□□□□□ -0.8
COMMD9-202ENST00000355500 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
COMMD9-202ENST00000355500 PHACTR3Q96KR7 559 aa10.07□□□□□ -0.8
COMMD9-202ENST00000355500 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
COMMD9-202ENST00000355500 FOXD4Q12950 439 aaPredicted RBP10.07□□□□□ -0.8
COMMD9-202ENST00000355500 DDX17Q92841 729 aaKnown RBP10.07□□□□□ -0.8
COMMD9-202ENST00000355500 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
COMMD9-202ENST00000355500 ZBTB40Q9NUA8 1239 aa10.07□□□□□ -0.8
COMMD9-202ENST00000355500 CHL1O00533 1208 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 IGHDP01880 384 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 SMC5Q8IY18 1101 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 GAS2L2Q8NHY3 880 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 MAP3K19Q56UN5 1328 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 CCDC96Q2M329 555 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 FRAT1Q92837 279 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-202ENST00000355500 MBIPQ9NS73 344 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 PTPRCP08575 1304 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 FBLN1P23142 703 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
COMMD9-202ENST00000355500 CDCA7Q9BWT1 371 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-202ENST00000355500 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
COMMD9-202ENST00000355500 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
COMMD9-202ENST00000355500 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 NGDNQ8NEJ9 315 aaKnown RBP10.05□□□□□ -0.8
COMMD9-202ENST00000355500 CARD10Q9BWT7 1032 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 NOB1Q9ULX3 412 aaKnown RBP10.05□□□□□ -0.8
COMMD9-202ENST00000355500 SUGT1Q9Y2Z0 365 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 BAG6P46379 1132 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 RPS6KL1Q9Y6S9 549 aa10.05□□□□□ -0.8
COMMD9-202ENST00000355500 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-202ENST00000355500 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
COMMD9-202ENST00000355500 IRF5Q13568 498 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
COMMD9-202ENST00000355500 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 SLC24A3Q9HC58 644 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 SIPA1L3O60292 1781 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-202ENST00000355500 NHSQ6T4R5 1651 aa10.04□□□□□ -0.8
COMMD9-202ENST00000355500 HMOX1P09601 288 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms