RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RGS3P49796 1198 aa21.58■■□□□ 1.04
VPS13B-201ENST00000355155 DNAAF4Q8WXU2 420 aa21.58■■□□□ 1.04
VPS13B-201ENST00000355155 UTYO14607 1347 aa21.58■■□□□ 1.04
VPS13B-201ENST00000355155 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
VPS13B-201ENST00000355155 C1orf115Q9H7X2 142 aa21.57■■□□□ 1.04
VPS13B-201ENST00000355155 KSR2Q6VAB6 950 aa21.57■■□□□ 1.04
VPS13B-201ENST00000355155 USP44Q9H0E7 712 aa21.56■■□□□ 1.04
VPS13B-201ENST00000355155 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
VPS13B-201ENST00000355155 EIF2S2P20042 333 aaKnown RBP21.56■■□□□ 1.04
VPS13B-201ENST00000355155 SRCIN1Q9C0H9 1055 aa21.55■■□□□ 1.04
VPS13B-201ENST00000355155 COL15A1P39059 1388 aa21.55■■□□□ 1.04
VPS13B-201ENST00000355155 HMMRO75330 724 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 ATP8B2P98198 1209 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 SLC39A6Q13433 755 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 TTC5Q8N0Z6 440 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 NECTIN2Q92692 538 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 SPATA31A1Q5TZJ5 1347 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 ZNF831Q5JPB2 1677 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 TUBGCP6Q96RT7 1819 aa21.54■■□□□ 1.04
VPS13B-201ENST00000355155 PRAMEF22A3QJZ6 481 aa21.53■■□□□ 1.04
VPS13B-201ENST00000355155 SLC4A10Q6U841 1118 aa21.53■■□□□ 1.04
VPS13B-201ENST00000355155 PROSER3Q2NL68 480 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 JCADQ9P266 1359 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 DOT1LQ8TEK3 1739 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 PI4KAP2A4QPH2 592 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 DDX58O95786 925 aaKnown RBP21.52■■□□□ 1.04
VPS13B-201ENST00000355155 BARGINQ6ZT62 677 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 PI4KAP1Q8N8J0 262 aa21.52■■□□□ 1.04
VPS13B-201ENST00000355155 RREB1Q92766 1687 aa21.52■■□□□ 1.03
VPS13B-201ENST00000355155 MTX1Q13505 466 aa21.51■■□□□ 1.03
VPS13B-201ENST00000355155 BCL9O00512 1426 aa21.51■■□□□ 1.03
VPS13B-201ENST00000355155 POLA2Q14181 598 aa21.51■■□□□ 1.03
VPS13B-201ENST00000355155 SPATA31A5Q5VU36 1347 aa21.51■■□□□ 1.03
VPS13B-201ENST00000355155 SPATA31A7Q8IWB4 1347 aa21.51■■□□□ 1.03
VPS13B-201ENST00000355155 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
VPS13B-201ENST00000355155 TJP1Q07157 1748 aa21.49■■□□□ 1.03
VPS13B-201ENST00000355155 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
VPS13B-201ENST00000355155 LINS1Q8NG48 757 aa21.49■■□□□ 1.03
VPS13B-201ENST00000355155 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
VPS13B-201ENST00000355155 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
VPS13B-201ENST00000355155 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
VPS13B-201ENST00000355155 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
VPS13B-201ENST00000355155 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
VPS13B-201ENST00000355155 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
VPS13B-201ENST00000355155 SPATA31A6Q5VVP1 1343 aa21.46■■□□□ 1.03
VPS13B-201ENST00000355155 THSD7AQ9UPZ6 1657 aa21.46■■□□□ 1.03
VPS13B-201ENST00000355155 OSBPL3Q9H4L5 887 aa21.46■■□□□ 1.03
VPS13B-201ENST00000355155 METTL22Q9BUU2 404 aaPredicted RBP21.45■■□□□ 1.02
VPS13B-201ENST00000355155 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
VPS13B-201ENST00000355155 LNPKQ9C0E8 428 aa21.45■■□□□ 1.02
VPS13B-201ENST00000355155 ANP32AP39687 249 aaKnown RBP21.45■■□□□ 1.02
VPS13B-201ENST00000355155 SALL3Q9BXA9 1300 aa21.45■■□□□ 1.02
VPS13B-201ENST00000355155 LRRFIP2Q9Y608 721 aaKnown RBP21.44■■□□□ 1.02
VPS13B-201ENST00000355155 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
VPS13B-201ENST00000355155 ANXA1P04083 346 aa21.44■■□□□ 1.02
VPS13B-201ENST00000355155 TMOD3Q9NYL9 352 aa21.44■■□□□ 1.02
VPS13B-201ENST00000355155 EXOC5O00471 708 aa21.43■■□□□ 1.02
VPS13B-201ENST00000355155 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
VPS13B-201ENST00000355155 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
VPS13B-201ENST00000355155 PLEKHM2Q8IWE5 1019 aa21.43■■□□□ 1.02
VPS13B-201ENST00000355155 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
VPS13B-201ENST00000355155 FNBP4Q8N3X1 1017 aaPredicted RBP21.42■■□□□ 1.02
VPS13B-201ENST00000355155 XAGE3Q8WTP9 111 aa21.42■■□□□ 1.02
VPS13B-201ENST00000355155 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
VPS13B-201ENST00000355155 PLBD2Q8NHP8 589 aa21.42■■□□□ 1.02
VPS13B-201ENST00000355155 PIGBQ92521 554 aa21.42■■□□□ 1.02
VPS13B-201ENST00000355155 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
VPS13B-201ENST00000355155 PNMA6EA0A0J9YXQ4 647 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
VPS13B-201ENST00000355155 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
VPS13B-201ENST00000355155 VPS72Q15906 364 aa21.4■■□□□ 1.02
VPS13B-201ENST00000355155 COPS6Q7L5N1 327 aa21.4■■□□□ 1.02
VPS13B-201ENST00000355155 NBPF7P0C2Y1 421 aaPredicted RBP21.4■■□□□ 1.02
VPS13B-201ENST00000355155 UNC5CLQ8IV45 518 aa21.4■■□□□ 1.02
VPS13B-201ENST00000355155 AOX1Q06278 1338 aa21.39■■□□□ 1.02
VPS13B-201ENST00000355155 NEURL1BA8MQ27 555 aa21.39■■□□□ 1.02
VPS13B-201ENST00000355155 ANKRD13DQ6ZTN6 518 aa21.39■■□□□ 1.02
VPS13B-201ENST00000355155 ANKRD36CQ5JPF3 1778 aa21.39■■□□□ 1.01
VPS13B-201ENST00000355155 CERKQ8TCT0 537 aa21.39■■□□□ 1.01
VPS13B-201ENST00000355155 GRM8O00222 908 aa21.38■■□□□ 1.01
VPS13B-201ENST00000355155 EIF5BO60841 1220 aaKnown RBP21.38■■□□□ 1.01
VPS13B-201ENST00000355155 MSH5O43196 834 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 TTC22Q5TAA0 569 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
VPS13B-201ENST00000355155 COL5A3P25940 1745 aaPredicted RBP21.36■■□□□ 1.01
VPS13B-201ENST00000355155 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
VPS13B-201ENST00000355155 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
VPS13B-201ENST00000355155 GCKRQ14397 625 aa21.36■■□□□ 1.01
VPS13B-201ENST00000355155 PPP1R42Q7Z4L9 355 aa21.36■■□□□ 1.01
VPS13B-201ENST00000355155 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
VPS13B-201ENST00000355155 KAZALD1Q96I82 304 aa21.35■■□□□ 1.01
VPS13B-201ENST00000355155 LRRCC1Q9C099 1032 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms